Q71U07 (TRBM_SAISC) Saimiri sciureus (Common squirrel monkey)

Thrombomodulin UniProtKBInterProInteractive Modelling

575 aa; Sequence (Fasta) Identical sequences: Homo sapiens: P07204

Sequence Features

Add
 516-539Helical
 137-158
 245-256
 252-265
 267-280
 288-296
 292-308
 310-323
 329-340
 336-349
 351-362
 369-378
 374-388
 390-404
 408-413
 417-425
 427-439
 445-455
 451-464
 466-480
 43-169C-type lectin-like
IPR001304PF00059
 305-327Complement Clr-like EGF domain
IPR026823PF12662
 406-439Thrombomodulin-like, EGF-like
IPR015149PF09064
 441-471EGF-like calcium-binding domain
IPR001881PF07645

Sequence Alignments

Experimental structures

DescriptionOligo-stateLigandsStructureRange
Crystal structure of the thrombin-thrombomodulin complex Heteromer
P00734; P07204;
FMT;CA;NA;NAG;0GJ;1dx5363-480
Assess
Crystal structure of thrombin mutant W215A/E217A fused to EGF456 of thrombomodulin via a 31-residue… Heteromer
P00734; P07204;
NAG;0G6;K;NA;NAG;5to3363-480
Assess
Crystal Structure of Na-free Thrombin in Complex with Thrombomodulin Heteromer
P00734; P07204;
SO4;CA;3gis367-481
Assess
THE STRUCTURE OF A NONADECAPEPTIDE OF THE FIFTH EGF DOMAIN OF THROMBOMODULIN COMPLEXED WITH THROMBIN Heteromer
P00734; P07204;
0G6;1hlt426-442
Assess
NMR STRUCTURE OF THROMBOMODULIN EGF(4-5)monomer NAG;1dqb362-444
Assess
FOURTH EGF-LIKE DOMAIN OF THROMBOMODULIN, NMR, 12 STRUCTURESmonomer 1zaq364-407
Assess
FIFTH EGF-LIKE DOMAIN OF THROMBOMODULIN (TMEGF5), NMR, MINIMIZED AVERAGE STRUCTUREmonomer 2adx405-444
Assess
FIFTH EGF-LIKE DOMAIN OF THROMBOMODULIN (TMEGF5), NMR, 14 STRUCTURESmonomer 1adx405-444
Assess
EPIDERMAL GROWTH FACTOR (EGF) SUBDOMAIN OF HUMAN THROMBOMODULIN (NMR, 14 STRUCTURES)monomer 1fge425-444
Assess
THE STRUCTURE OF A 19 RESIDUE FRAGMENT FROM THE C-LOOP OF THE FOURTH EPIDERMAL GROWTH FACTOR-LIKE D…monomer 1tmr389-407
Assess
EPIDERMAL GROWTH FACTOR (EGF) SUBDOMAIN OF HUMAN THROMBOMODULIN (NMR, 11 STRUCTURES)monomer 1fgd427-444
Assess
THROMBIN-BOUND STRUCTURE OF AN EGF SUBDOMAIN FROM HUMAN THROMBOMODULIN DETERMINED BY TRANSFERRED NU…monomer 1egt427-444
Assess

Homology models

Oligo-stateQMEANTemplateRangeSeq id (%)Ligands
monomer -4.11 4mth.1.A25-170
25.56
Assess
monomer -4.16 1egi.1.A25-170
22.31
Assess
monomer -1.92 5fm9.1.A326-471
26.09
Assess
monomer -4.95 6pog.1.B255-473
30.43
Assess
monomer -3.78 4xbm.2.A221-401
25.75
Assess