Q71U07 (TRBM_SAISC) Saimiri sciureus (Common squirrel monkey)
Thrombomodulin UniProtKBInterProInteractive Modelling
575 aa; Sequence (Fasta) Identical sequences: Homo sapiens: P07204
It is possible new templates exist for this target since these models were created.
Sequence Features
| 516-539 | Helical | ||
| 137-158 | |||
| 245-256 | |||
| 252-265 | |||
| 267-280 | |||
| 288-296 | |||
| 292-308 | |||
| 310-323 | |||
| 329-340 | |||
| 336-349 | |||
| 351-362 | |||
| 369-378 | |||
| 374-388 | |||
| 390-404 | |||
| 408-413 | |||
| 417-425 | |||
| 427-439 | |||
| 445-455 | |||
| 451-464 | |||
| 466-480 | |||
| 43-169 | C-type lectin-like IPR001304PF00059 | ||
| 305-327 | Complement Clr-like EGF domain IPR026823PF12662 | ||
| 406-439 | Thrombomodulin-like, EGF-like IPR015149PF09064 | ||
| 441-471 | EGF-like calcium-binding domain IPR001881PF07645 |
Sequence Alignments
Experimental structures
| Description | Oligo-state | Ligands | Structure | Range |
|---|---|---|---|---|
| Crystal structure of the thrombin-thrombomodulin complex |
Heteromer P00734; P07204; | 1×FMT; 1×CA; 2×NA; 1×NAG; 4×0GJ; | 1dx5 | |
| Assess | ||||
| Crystal structure of thrombin mutant W215A/E217A fused to EGF456 of thrombomodulin via a 31-residue… |
Heteromer P00734; P07204; | 1×NAG; 1×0G6; 1×K; 1×NA; 2×NAG; | 5to3 | |
| Assess | ||||
| Crystal Structure of Na-free Thrombin in Complex with Thrombomodulin |
Heteromer P00734; P07204; | 7×SO4; 1×CA; | 3gis | |
| Assess | ||||
| THE STRUCTURE OF A NONADECAPEPTIDE OF THE FIFTH EGF DOMAIN OF THROMBOMODULIN COMPLEXED WITH THROMBIN |
Heteromer P00734; P07204; | 2×0G6; | 1hlt | |
| Assess | ||||
| NMR STRUCTURE OF THROMBOMODULIN EGF(4-5) | monomer | 2×NAG; | 1dqb | |
| Assess | ||||
| FOURTH EGF-LIKE DOMAIN OF THROMBOMODULIN, NMR, 12 STRUCTURES | monomer | 1zaq | ||
| Assess | ||||
| FIFTH EGF-LIKE DOMAIN OF THROMBOMODULIN (TMEGF5), NMR, MINIMIZED AVERAGE STRUCTURE | monomer | 2adx | ||
| Assess | ||||
| FIFTH EGF-LIKE DOMAIN OF THROMBOMODULIN (TMEGF5), NMR, 14 STRUCTURES | monomer | 1adx | ||
| Assess | ||||
| EPIDERMAL GROWTH FACTOR (EGF) SUBDOMAIN OF HUMAN THROMBOMODULIN (NMR, 14 STRUCTURES) | monomer | 1fge | ||
| Assess | ||||
| THE STRUCTURE OF A 19 RESIDUE FRAGMENT FROM THE C-LOOP OF THE FOURTH EPIDERMAL GROWTH FACTOR-LIKE D… | monomer | 1tmr | ||
| Assess | ||||
| EPIDERMAL GROWTH FACTOR (EGF) SUBDOMAIN OF HUMAN THROMBOMODULIN (NMR, 11 STRUCTURES) | monomer | 1fgd | ||
| Assess | ||||
| THROMBIN-BOUND STRUCTURE OF AN EGF SUBDOMAIN FROM HUMAN THROMBOMODULIN DETERMINED BY TRANSFERRED NU… | monomer | 1egt | ||
| Assess | ||||
Homology models
| Oligo-state | QMEAN | Template | Range | Seq id (%) | Ligands |
|---|---|---|---|---|---|
| monomer | -4.11 | 4mth.1.A | 25.56 | ||
| Assess | |||||
| monomer | -4.16 | 1egi.1.A | 22.31 | ||
| Assess | |||||
| monomer | -1.92 | 5fm9.1.A | 26.09 | ||
| Assess | |||||
| monomer | -4.95 | 6pog.1.B | 30.43 | ||
| Assess | |||||
| monomer | -3.78 | 4xbm.2.A | 25.75 | ||
| Assess | |||||