Q72HM6 (RPOC_THET2) Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
DNA-directed RNA polymerase subunit beta' UniProtKBInterProSTRINGInteractive Modelling
1524 aa; Sequence (Fasta)
It is possible new templates exist for this target since these models were created.
Sequence Features
| 58 | Zinc 1 | ||
| 60 | Zinc 1 | ||
| 73 | Zinc 1 | ||
| 76 | Zinc 1 | ||
| 739 | Magnesium | ||
| 741 | Magnesium | ||
| 743 | Magnesium | ||
| 1112 | Zinc 2 | ||
| 1194 | Zinc 2 | ||
| 1201 | Zinc 2 | ||
| 1204 | Zinc 2 | ||
| 2-159 | RNA polymerase Rpb1, domain 1 IPR007080PF04997 | ||
| 479-618 | RNA polymerase Rpb1, domain 1 IPR007080PF04997 | ||
| 620-761 | RNA polymerase, alpha subunit IPR000722PF00623 | ||
| 768-953 | RNA polymerase Rpb1, domain 3 IPR007066PF04983 | ||
| 984-1050 | RNA polymerase Rpb1, domain 4 IPR007083PF05000 | ||
| 1064-1285 | RNA polymerase Rpb1, domain 5 IPR007081PF04998 | ||
| 1308-1429 | RNA polymerase Rpb1, domain 5 IPR007081PF04998 |
Sequence Alignments
Experimental structures
| Description | Oligo-state | Ligands | Structure | Range |
|---|---|---|---|---|
| Thermus thermophiles RNA polymerase in complex with promoter DNA and antibiotic Kanglemycin A |
Heteromer Q72HM5; Q72I32; Q72ID6; Q72L95; | 1×KNG; 2×ZN; 2×MG; | 6cuu | |
| Assess | ||||
Homology models
| Oligo-state | QMEAN | Template | Range | Seq id (%) | Ligands |
|---|---|---|---|---|---|
| monomer | -3.93 | 3dxj.1.D | 99.80 | 1×MG; 2×ZN; | |
| Assess | |||||
| monomer | -4.50 | 6c04.1.D | 51.11 | 1×ZN; | |
| Assess | |||||