Q72I11 (RL16_THET2) Thermus thermophilus (strain ATCC BAA-163 / DSM 7039 / HB27)
Large ribosomal subunit protein uL16 UniProtKBInterProInteractive Modelling
141 aa; Sequence (Fasta) ;
1 identical sequence: Thermus thermophilus: A0A7R7YJ10
It is possible new templates exist for this target since these models were created.
Available Structures
18 Experimental Structures
| Description | PDB ID | Oligo-state | Range | Seq id (%) | Ligands | |
|---|---|---|---|---|---|---|
| E. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codon |
Heteromer P0A7I0; P60493; P61941; P62238; P62613; P62652; P62653; P62654; P62655; P62656; P62657; P62658; P62659; P62660; P62661; P62662; P62663; P62664; P62665; P62666; P62667; P62668; P62669; P80340; Q72G84; Q72GV5; Q72GW3; Q72HR2; Q72I04; Q72I05; Q72I06; Q72I07; Q72I09; Q72I12; Q72I14; Q72I15; Q72I16; Q72I19; Q72I20; Q72I22; Q72I23; Q72I28; Q72I33; Q72IA7; Q72IN1; Q72JR0; Q72JU9; Q72L76; Q72L77; | 100 | 1510×MG; 5×ZN; | |||
| Thermus thermophilus 70S ribosome lacking ribosomal protein uS17 |
Heteromer H7GHW0; P0AD49; P62238; P62613; P62652; P62653; P62654; P62655; P62656; P62657; P62659; P62660; P62661; P62662; P62663; P62664; P62665; P62666; P62667; P62668; P62669; P80340; Q72G84; Q72GV5; Q72GW3; Q72HR2; Q72HR3; Q72I04; Q72I05; Q72I06; Q72I07; Q72I09; Q72I12; Q72I14; Q72I15; Q72I16; Q72I19; Q72I20; Q72I22; Q72I23; Q72I28; Q72I33; Q72IA7; Q72IN1; Q72JR0; Q72JU9; Q72L76; Q72L77; | 100 | 4×MPD; 1306×MG; 2×ARG; 6×ZN; 1×SF4; | |||
| Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70… |
Heteromer P0A7I0; P61941; P62238; P62613; P62652; P62653; P62654; P62655; P62656; P62657; P62658; P62659; P62660; P62661; P62662; P62663; P62664; P62665; P62666; P62667; P62668; P62669; P80340; Q72G84; Q72GV5; Q72GW3; Q72HR2; Q72HR3; Q72I04; Q72I05; Q72I06; Q72I07; Q72I09; Q72I12; Q72I14; Q72I15; Q72I16; Q72I19; Q72I20; Q72I22; Q72I23; Q72I28; Q72I33; Q72IA7; Q72IN1; Q72JR0; Q72JU9; Q72L76; Q72L77; | 100 | 727×MG; 1×BLS; 5×ZN; | |||
| Antibiotic blasticidin S and E. coli release factor 1 bound to the 70S ribosome |
Heteromer P0A7I0; P61941; P62238; P62613; P62652; P62653; P62654; P62655; P62656; P62657; P62658; P62659; P62660; P62661; P62662; P62663; P62664; P62665; P62666; P62667; P62668; P62669; P80340; Q72G84; Q72GV5; Q72GW3; Q72HR2; Q72HR3; Q72I04; Q72I05; Q72I06; Q72I07; Q72I09; Q72I12; Q72I14; Q72I15; Q72I16; Q72I19; Q72I20; Q72I22; Q72I23; Q72I28; Q72I33; Q72IA7; Q72IN1; Q72JR0; Q72JU9; Q72L76; Q72L77; | 100 | 896×MG; 1×BLS; 5×ZN; | |||
| 70S ribosome translocation intermediate GDPNP-I containing elongation factor EFG/GDPNP, mRNA, and t… |
Heteromer P61941; P62238; P62442; P62652; P62653; P62654; P62655; P62656; P62657; P62658; P62659; P62660; P62661; P62662; P62663; P62664; P62665; P62666; P62667; P62668; P62669; P80340; Q5SHN5; Q5SHQ0; Q72G84; Q72GS2; Q72GV9; Q72GW3; Q72HR2; Q72HR3; Q72I04; Q72I05; Q72I06; Q72I07; Q72I09; Q72I12; Q72I14; Q72I15; Q72I19; Q72I20; Q72I22; Q72I23; Q72I28; Q72I33; Q72IA7; Q72IN1; Q72JR0; Q72JU9; Q72L76; Q72L77; | 99.29 | 1×GNP; 1×MG; | |||
| 70S Ribosome translocation intermediate FA-3.6A containing elongation factor EFG/FUSIDIC ACID/GDP, … |
Heteromer P61941; P62238; P62442; P62652; P62653; P62654; P62655; P62656; P62657; P62658; P62659; P62660; P62661; P62662; P62663; P62664; P62665; P62666; P62667; P62668; P62669; P80340; Q5SHN5; Q5SHQ0; Q72G84; Q72GS2; Q72GV9; Q72GW3; Q72HR2; Q72HR3; Q72I04; Q72I05; Q72I06; Q72I07; Q72I09; Q72I12; Q72I14; Q72I15; Q72I19; Q72I20; Q72I22; Q72I23; Q72I28; Q72I33; Q72IA7; Q72IN1; Q72JR0; Q72JU9; Q72L76; Q72L77; | 99.29 | 1×FUA; 1×GDP; 1×MG; | |||
| E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome |
Heteromer P0A7I0; P61941; P62238; P62613; P62652; P62653; P62654; P62655; P62656; P62657; P62658; P62659; P62660; P62661; P62662; P62663; P62664; P62665; P62666; P62667; P62668; P62669; Q72G84; Q72GV5; Q72GW3; Q72HR2; Q72HR3; Q72I04; Q72I05; Q72I06; Q72I07; Q72I09; Q72I12; Q72I14; Q72I15; Q72I16; Q72I19; Q72I20; Q72I22; Q72I23; Q72I28; Q72I33; Q72IA7; Q72IN1; Q72JR0; Q72JU9; Q72L76; Q72L77; | 100 | 826×MG; 5×ZN; | |||
| 70S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA, an… |
Heteromer A0A1J1EJ43; A0A1J1EU54; P0DOY7; P41201; P60490; P60493; P60494; P61941; P62238; P62442; P62653; P62654; P62655; P62656; P62657; P62659; P62660; P62662; P62663; P62664; P62665; P62666; P62667; P62668; P80339; P80340; P80374; P80380; Q5SHN9; Q72GS2; Q72GW3; Q72HR2; Q72I01; Q72I04; Q72I06; Q72I07; Q72I09; Q72I12; Q72I15; Q72I19; Q72I20; Q72I22; Q72I23; Q72I28; Q72I33; Q72IA7; Q72IN1; Q72JR0; Q72L76; Q72L77; | 99.29 | 1×GDP; 1×FUA; 4×NMY; 1×MG; | |||
| 70S ribosome translocation intermediate GDPNP-II containing elongation factor EFG/GDPNP, mRNA, and … |
Heteromer P61941; P62238; P62442; P62652; P62653; P62654; P62655; P62656; P62657; P62658; P62659; P62660; P62661; P62662; P62663; P62664; P62665; P62666; P62667; P62668; P62669; P80340; Q5SHN5; Q5SHQ0; Q72G84; Q72GS2; Q72GV9; Q72GW3; Q72HR2; Q72HR3; Q72I04; Q72I05; Q72I06; Q72I07; Q72I09; Q72I12; Q72I14; Q72I15; Q72I19; Q72I20; Q72I22; Q72I23; Q72I28; Q72I33; Q72IA7; Q72IN1; Q72JR0; Q72JU9; Q72L76; Q72L77; | 99.29 | 1×GNP; 1×MG; | |||
| 70S Ribosome translocation intermediate FA-4.2A containing elongation factor EFG/FUSIDIC ACID/GDP, … |
Heteromer P61941; P62238; P62442; P62652; P62653; P62654; P62655; P62656; P62657; P62658; P62659; P62660; P62661; P62662; P62663; P62664; P62665; P62666; P62667; P62668; P62669; P80340; Q5SHN5; Q5SHQ0; Q72G84; Q72GS2; Q72GV9; Q72GW3; Q72HR2; Q72HR3; Q72I04; Q72I05; Q72I06; Q72I07; Q72I09; Q72I12; Q72I14; Q72I15; Q72I19; Q72I20; Q72I22; Q72I23; Q72I28; Q72I33; Q72IA7; Q72IN1; Q72JR0; Q72JU9; Q72L76; Q72L77; | 99.29 | 1×FUA; 1×GDP; | |||
| Structural basis for translation termination on the 70S ribosome. |
Heteromer P61941; P62238; P62613; P62652; P62653; P62654; P62655; P62656; P62657; P62658; P62659; P62660; P62661; P62662; P62663; P62664; P62665; P62666; P62667; P62668; P62669; P80340; Q72G84; Q72GS1; Q72GV5; Q72GW3; Q72HB8; Q72HR2; Q72HR3; Q72I04; Q72I05; Q72I06; Q72I07; Q72I09; Q72I12; Q72I14; Q72I15; Q72I16; Q72I19; Q72I20; Q72I22; Q72I23; Q72I33; Q72IA7; Q72IN1; Q72JR0; Q72JU9; Q72L76; Q72L77; | 100 | 1260×MG; 2×ZN; | |||
| Crystal structure of a complex containing domain 3 of CrPV IGR IRES RNA bound to the 70S ribosome. |
Heteromer P61941; P62238; P62613; P62652; P62653; P62654; P62655; P62656; P62657; P62658; P62659; P62660; P62661; P62662; P62663; P62664; P62665; P62666; P62667; P62668; P62669; P80340; Q72G84; Q72GS1; Q72GV5; Q72GW3; Q72HR2; Q72HR3; Q72I04; Q72I05; Q72I06; Q72I07; Q72I09; Q72I12; Q72I14; Q72I15; Q72I16; Q72I19; Q72I20; Q72I22; Q72I23; Q72I33; Q72IA7; Q72IN1; Q72JR0; Q72JU9; Q72L76; Q72L77; | 100 | 595×MG; 2×ZN; | |||
| Crystal structure of a complex containing domain 3 from the PSIV IGR IRES RNA bound to the 70S ribo… |
Heteromer P61941; P62238; P62613; P62652; P62653; P62654; P62655; P62656; P62657; P62658; P62659; P62660; P62661; P62662; P62663; P62664; P62665; P62666; P62667; P62668; P62669; P80340; Q72G84; Q72GS1; Q72GV5; Q72GW3; Q72HR2; Q72HR3; Q72I04; Q72I05; Q72I06; Q72I07; Q72I09; Q72I12; Q72I14; Q72I15; Q72I16; Q72I19; Q72I20; Q72I22; Q72I23; Q72I33; Q72IA7; Q72IN1; Q72JR0; Q72JU9; Q72L76; Q72L77; | 100 | 1169×MG; 2×ZN; | |||
| Recognition of the amber stop codon by release factor RF1. |
Heteromer P61941; P62238; P62613; P62652; P62653; P62654; P62655; P62656; P62657; P62658; P62659; P62660; P62661; P62662; P62663; P62664; P62665; P62666; P62667; P62668; P62669; P80340; Q72G84; Q72GS1; Q72GV5; Q72GW3; Q72HB8; Q72HR2; Q72HR3; Q72I04; Q72I05; Q72I06; Q72I07; Q72I09; Q72I12; Q72I14; Q72I15; Q72I16; Q72I19; Q72I20; Q72I22; Q72I23; Q72I33; Q72IA7; Q72IN1; Q72JR0; Q72JU9; Q72L76; Q72L77; | 100 | 250×MG; 2×ZN; | |||
| X-ray Crystal complex showing Spontaneous Ribosomal Translocation of mRNA and tRNAs into a Chimeric… |
Heteromer P61941; P62238; P62613; P62652; P62653; P62654; P62655; P62656; P62657; P62658; P62659; P62660; P62661; P62662; P62663; P62664; P62665; P62666; P62667; P62668; P62669; P80340; Q72G84; Q72GV5; Q72GV9; Q72GW3; Q72HR2; Q72HR3; Q72I04; Q72I05; Q72I06; Q72I07; Q72I09; Q72I12; Q72I14; Q72I15; Q72I16; Q72I19; Q72I20; Q72I22; Q72I23; Q72I28; Q72I33; Q72IA7; Q72IN1; Q72JR0; Q72JU9; Q72L76; Q72L77; | 100 | 141×MG; 1×SF4; | |||
| Crystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2. |
Heteromer P61941; P62238; P62442; P62613; P62652; P62653; P62654; P62655; P62656; P62657; P62658; P62659; P62660; P62661; P62662; P62663; P62664; P62665; P62666; P62667; P62668; P62669; P80340; Q72G84; Q72GJ6; Q72GV5; Q72GW3; Q72HR2; Q72HR3; Q72I04; Q72I05; Q72I06; Q72I07; Q72I09; Q72I12; Q72I14; Q72I15; Q72I16; Q72I19; Q72I20; Q72I22; Q72I23; Q72I33; Q72IA7; Q72IN1; Q72JR0; Q72JU9; Q72L76; Q72L77; | 100 | 1284×MG; 2×ZN; | |||
| Crystal Structure of Blasticidin S Bound to Thermus Thermophilus 70S Ribosome. |
Heteromer P61941; P62238; P62613; P62652; P62653; P62654; P62655; P62656; P62657; P62658; P62659; P62660; P62661; P62662; P62663; P62664; P62665; P62666; P62667; P62668; P62669; P80340; Q72G84; Q72GV5; Q72GW3; Q72HR2; Q72HR3; Q72I04; Q72I05; Q72I06; Q72I07; Q72I09; Q72I12; Q72I14; Q72I15; Q72I16; Q72I19; Q72I20; Q72I22; Q72I23; Q72I33; Q72IA7; Q72IN1; Q72JR0; Q72JU9; Q72L76; Q72L77; | 100 | 1×BLS; 2050×MG; 2×ZN; | |||
| IRES bound to bacterial Ribosome |
Heteromer P61941; P62238; P62442; P62613; P62652; P62653; P62654; P62655; P62656; P62657; P62658; P62659; P62660; P62661; P62662; P62663; P62664; P62665; P62666; P62667; P62668; P62669; P80340; Q72G84; Q72GV5; Q72GW3; Q72HR2; Q72HR3; Q72I04; Q72I05; Q72I06; Q72I07; Q72I09; Q72I12; Q72I14; Q72I15; Q72I16; Q72I19; Q72I20; Q72I22; Q72I23; Q72I33; Q72IA7; Q72IN1; Q72JR0; Q72JU9; Q72L76; Q72L77; | 100 | 2×ZN; | |||
1 SWISS-MODEL model
| Template | Oligo-state | QMEAN | Range | Ligands | Trg-Tpl Seq id (%) | |
|---|---|---|---|---|---|---|
| 5v8i.2.L | monomer | 0.78 | 100.00 | |||