Q7LBC6 | SWISS-MODEL Repository

Q7LBC6 (KDM3B_HUMAN) Homo sapiens (Human)

Lysine-specific demethylase 3B UniProtKB InterPro STRING Interactive Modelling

1761 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3)

It is possible new templates exist for this target since these models were created.

Available Structures

36 Experimental Structures

Description	PDB ID	Oligo-state	Range	Seq id (%)	Ligands
Crystal structure of JmjC domain of human histone 3 Lysine-specific demethylase 3B (KDM3B)	4c8d PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	1380-1720	100.0	1×MN; 1×OGA; 1×GOL; 2×ACT; 1×CL;
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PanDDA analysis group deposition of ground-state model of Human JMJD1B	5r7x PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	1380-1717	99.41	4×CL; 1×MN;
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PanDDA analysis group deposition -- Crystal Structure of JMJD1B in complex with TD000005c	5rar PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	1380-1717	99.41	2×S9D; 4×CL; 1×MN;
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PanDDA analysis group deposition -- Crystal Structure of JMJD1B in complex with FM010010a	5rb5 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	1380-1717	99.41	2×S9S; 4×CL; 1×MN;
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PanDDA analysis group deposition -- Crystal Structure of JMJD1B in complex with FM001784a	5rb2 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	1380-1717	99.41	1×S9P; 4×CL; 1×MN;
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PanDDA analysis group deposition -- Crystal Structure of JMJD1B in complex with FM001726a	5rab PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	1380-1717	99.41	1×S4Y; 4×CL; 1×MN;
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PanDDA analysis group deposition -- Crystal Structure of JMJD1B in complex with FM001767a	5rag PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	1380-1717	99.41	1×O3G; 4×CL; 1×MN;
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PanDDA analysis group deposition -- Crystal Structure of JMJD1B in complex with XS039249d	5rb3 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	1380-1717	99.41	1×MPV; 4×CL; 1×MN;
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PanDDA analysis group deposition -- Crystal Structure of JMJD1B in complex with XS040404c	5rai PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	1380-1717	99.41	1×S3M; 4×CL; 1×MN;
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PanDDA analysis group deposition -- Crystal Structure of JMJD1B in complex with FM001677a	5rb4 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	1380-1717	99.41	1×A6Z; 4×CL; 1×MN;
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PanDDA analysis group deposition -- Crystal Structure of JMJD1B in complex with FM009970a	5raw PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	1380-1717	99.41	1×JJ7; 4×CL; 1×MN;
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PanDDA analysis group deposition -- Crystal Structure of JMJD1B in complex with FM001648a	5rb7 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	1380-1717	99.41	1×S4D; 4×CL; 1×MN;
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PanDDA analysis group deposition -- Crystal Structure of JMJD1B in complex with FM009990a	5raa PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	1380-1717	99.41	1×S3Y; 4×CL; 1×MN;
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PanDDA analysis group deposition -- Crystal Structure of JMJD1B in complex with XS036302b	5ras PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	1380-1717	99.41	4×CL; 1×MN;
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PanDDA analysis group deposition -- Crystal Structure of JMJD1B in complex with FM001084a	5rao PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	1380-1717	99.41	1×S3S; 4×CL; 1×MN;
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PanDDA analysis group deposition -- Crystal Structure of JMJD1B in complex with BD009815a	5raj PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	1380-1717	99.41	1×W77; 4×CL; 1×MN;
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PanDDA analysis group deposition -- Crystal Structure of JMJD1B in complex with FM001559a	5raf PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	1380-1717	99.41	1×S5G; 4×CL; 1×MN;
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PanDDA analysis group deposition -- Crystal Structure of JMJD1B in complex with FM001569a	5rb6 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	1380-1717	99.41	1×S9V; 4×CL; 1×MN;
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PanDDA analysis group deposition -- Crystal Structure of JMJD1B in complex with FM001469a	5ray PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	1380-1717	99.41	1×S9M; 4×CL; 1×MN;
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PanDDA analysis group deposition -- Crystal Structure of JMJD1B in complex with FM010032a	5rah PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	1380-1717	99.41	1×GX4; 4×CL; 1×MN;
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PanDDA analysis group deposition -- Crystal Structure of JMJD1B in complex with XS039332c	5ral PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	1380-1717	99.41	4×CL; 1×MN;
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PanDDA analysis group deposition -- Crystal Structure of JMJD1B in complex with XS040486b	5rak PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	1380-1717	99.41	1×N6Y; 4×CL; 1×MN;
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PanDDA analysis group deposition -- Crystal Structure of JMJD1B in complex with FM001810a	5rac PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	1380-1717	99.41	1×O3M; 4×CL; 1×MN;
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PanDDA analysis group deposition -- Crystal Structure of JMJD1B in complex with DA000165b	5rau PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	1380-1717	99.41	1×HGE; 4×CL; 1×MN;
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PanDDA analysis group deposition -- Crystal Structure of JMJD1B in complex with FM001700a	5rb1 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	1380-1717	99.41	1×S4V; 4×CL; 1×MN;
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PanDDA analysis group deposition -- Crystal Structure of JMJD1B in complex with FM001763a	5rav PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	1380-1717	99.41	1×S9G; 4×CL; 1×MN;
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PanDDA analysis group deposition -- Crystal Structure of JMJD1B in complex with FM010013a	5raz PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	1380-1717	99.41	1×K0G; 4×CL; 1×MN;
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PanDDA analysis group deposition -- Crystal Structure of JMJD1B in complex with FM001577a	5raq PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	1380-1717	99.41	1×S5J; 4×CL; 1×MN;
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PanDDA analysis group deposition -- Crystal Structure of JMJD1B in complex with FM001558a	5rae PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	1380-1717	99.41	1×S5A; 4×CL; 1×MN;
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PanDDA analysis group deposition -- Crystal Structure of JMJD1B in complex with FM001568a	5rad PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	1380-1717	99.41	1×AYJ; 4×CL; 1×MN;
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PanDDA analysis group deposition -- Crystal Structure of JMJD1B in complex with FM000707a	5rap PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	1380-1717	99.41	1×S64; 4×CL; 1×MN;
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PanDDA analysis group deposition -- Crystal Structure of JMJD1B in complex with FM010020a	5rb0 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	1380-1717	99.41	4×CL; 1×MN;
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PanDDA analysis group deposition -- Crystal Structure of JMJD1B in complex with XS039080d	5ran PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	1380-1717	99.41	1×RYP; 4×CL; 1×MN;
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PanDDA analysis group deposition -- Crystal Structure of JMJD1B in complex with FM010054a	5rax PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	1380-1717	99.41	4×CL; 1×MN;
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PanDDA analysis group deposition -- Crystal Structure of JMJD1B in complex with XS038544d	5ram PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	1380-1717	99.41	1×S3V; 4×CL; 1×MN;
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Crystal structure of KDM3B in complex with 5-(1H-tetrazol-5-yl)quinolin-8-ol	6rbj PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	1380-1717	100.0	2×EDO; 1×JX8; 1×MN; 1×CL;
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1 SWISS-MODEL model

	Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
	6ydv.2.A	monomer	0.84	1380-1725	1×MN;	99.43
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	Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

	Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

2 SWISS-MODEL models built on isoform sequence

Isoform	Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
Isoform 2	6ydv.2.A	monomer	0.85	1036-1381	1×MN;	99.43
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Isoform 3	6ydv.2.A	monomer	0.88	378-723	1×MN;	99.43
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Q7LBC6 (KDM3B_HUMAN) Homo sapiens (Human)

Lysine-specific demethylase 3B UniProtKBInterProSTRINGInteractive Modelling

Available Structures

36 Experimental Structures

1 SWISS-MODEL model

2 SWISS-MODEL models built on isoform sequence

Alignments

Background

Resolution

Lysine-specific demethylase 3B UniProtKB InterPro STRING Interactive Modelling