Q8IYB3 | SWISS-MODEL Repository

Q8IYB3 (SRRM1_HUMAN) Homo sapiens (Human)

Serine/arginine repetitive matrix protein 1 UniProtKB InterPro STRING Interactive Modelling

904 aa; Sequence (Fasta) ; (Isoform 2); 4 identical sequences: Homo sapiens: A0A0S2Z4W1; Pan troglodytes: K7D4C6, A0A6D2VWD8; Nomascus leucogenys: G1RCK9

It is possible new templates exist for this target since these models were created.

Available Structures

7 Experimental Structures

Description	PDB ID	Oligo-state	Range	Ligands
Cryo-EM Structure of the Activated Human Minor Spliceosome (minor Bact Complex)	7dvq SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O15541; O43660; O60231; O75533; O75643; P14678; P62304; P62306; P62308; P62314; P62316; P62318; Q13356; Q13435; Q13573; Q15029; Q15393; Q15427; Q5RL73; Q6P2Q9; Q6UX04; Q7RTV0; Q8TAD8; Q92917; Q96DI7; Q99459; Q9BRD0; Q9BWG6; Q9BWJ5; Q9BZJ0; Q9H6L4; Q9HCG8; Q9P013; Q9P021; Q9UQ35; Q9Y388; Q9Y3B4;	1-126	1×IHP; 1×GTP; 5×MG; 2×K; 1×G5J; 7×ZN;
Assess
Human pre-Bact-2 spliceosome (SF3b/U2 snRNP portion)	7abh SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O60870; O75533; Q12874; Q13435; Q15393; Q15427; Q15428; Q7RTV0; Q8TAD8; Q99459; Q9BWJ5; Q9Y388; Q9Y3B4;	32-126
Assess
Human pre-Bact-2 spliceosome	7abi SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O43660; O60306; O60508; O60870; O75533; O75643; P08579; P09661; P14678; P41223; P55081; P62304; P62306; P62308; P62314; P62316; P62318; Q12874; Q13356; Q13435; Q13573; Q15029; Q15393; Q15427; Q15428; Q15459; Q6P2Q9; Q7RTV0; Q8NAV1; Q8TAD8; Q8WYA6; Q96DI7; Q96NC0; Q99459; Q9BRD0; Q9BWJ5; Q9BZJ0; Q9BZL1; Q9HCS7; Q9NW64; Q9P013; Q9UNP9; Q9Y388; Q9Y3B4;	32-126	1×GTP; 1×MG; 1×IHP;
Assess
human Bact spliceosome core structure	6ff4 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O15541; O43660; O60508; O75533; P41223; Q13435; Q13573; Q15029; Q15393; Q15428; Q6P2Q9; Q6UX04; Q7RTV0; Q99459; Q9BRD0; Q9BWJ5; Q9BZJ0; Q9NW64; Q9P013; Q9UQ35; Q9Y388; Q9Y3B4; Q9Y3C6;	32-126	4×MG; 1×IHP; 1×GTP; 10×ZN;
Assess
Human pre-Bact-1 spliceosome	7abg SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O14776; O43660; O75533; O75643; O95777; P08579; P09661; P14678; P41223; P52298; P55081; P62304; P62306; P62308; P62310; P62312; P62314; P62316; P62318; Q07955; Q09161; Q12874; Q13435; Q13573; Q15029; Q15393; Q15427; Q15428; Q15459; Q6P2Q9; Q7RTV0; Q8NAV1; Q8TAD8; Q96DI7; Q96NC0; Q99459; Q9BWJ5; Q9BZL1; Q9NW64; Q9P013; Q9UK45; Q9Y2W2; Q9Y333; Q9Y3B4; Q9Y4Y9; Q9Y4Z0;	32-126	1×IHP; 1×GTP; 1×MG; 1×GTG;
Assess
human Bact spliceosome core structure	6ff7 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O15541; O43660; O60231; O60306; O60508; O75533; O75643; O75934; P08579; P09661; P14678; P41223; P62304; P62306; P62308; P62314; P62316; P62318; Q12874; Q13435; Q13573; Q15029; Q15393; Q15428; Q15459; Q6P2Q9; Q6UX04; Q7RTV0; Q8TAD8; Q96DI7; Q99459; Q9BRD0; Q9BWJ5; Q9BZJ0; Q9HCG8; Q9HCS7; Q9NW64; Q9P013; Q9ULR0; Q9UMS4; Q9UNP9; Q9UQ35; Q9Y388; Q9Y3B4; Q9Y3C6;	32-126	11×ZN; 5×MG; 1×IHP; 1×GTP; 2×ADP;
Assess
Solution structure of the PWI motif from SRm160	1mp1 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	27-134
Assess

2 SWISS-MODEL models

Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
1mp1.1.A	monomer	0.81	30-123		100.00
Assess
7dvq.1.j	monomer	0.67	1-126		100.00
Assess

Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

2 SWISS-MODEL models built on isoform sequence

Template	Isoform	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
Isoform 2	1mp1.1.A	monomer	0.81	30-123		100.00
Assess
Isoform 2	7dvq.1.j	monomer	0.67	1-126		100.00
Assess

Alignments