Q8NB78 (KDM1B_HUMAN) Homo sapiens (Human)

Lysine-specific histone demethylase 2 UniProtKBInterProInteractive Modelling

822 aa; Sequence (Fasta) ; (Isoform 2; Isoform 4)

Available Structures

15 Experimental Structures

DescriptionPDB IDOligo-stateRangeSeq id (%)Ligands
Complex structure of LSD2/AOF1/KDM1b with H3K4 mimic Heteromer
P68431;
50-822
100.0ZN;FAD;
Crystal structure of LSD2-NPAC with H3(1-26)in space group P21 Heteromer
Q49A26; Q92133;
51-822
100.0FAD;ZN;
Crystal structure of LSD2-NPAC with H3 in space group P3221 Heteromer
P84243; Q49A26;
51-822
100.0FAD;IOD;GOL;ZN;
Crystal structure of LSD2-NPAC with H3 in space group P21 Heteromer
P84243; Q49A26;
51-822
100.0FAD;GOL;ZN;
Crystal structure of LSD2 with H3 Heteromer
P84243;
51-822
100.0FAD;ZN;
Structure of LSD2/NPAC-linker/nucleosome core particle complex: Class 3 Heteromer
P02281; P06897; P62799; P84233; Q49A26;
51-822
100.0FAD;ZN;
Structure of LSD2/NPAC-linker/nucleosome core particle complex: Class 2 Heteromer
P02281; P06897; P62799; P84233; Q49A26;
51-822
100.0FAD;ZN;
Crystal structure of LSD2-NPAC Heteromer
Q49A26;
51-821
100.0FAD;GOL;ZN;PGE;
Crystal structure of LSD2-NPAC with tranylcypromine Heteromer
Q49A26;
51-821
100.0FA9;ZN;
Crystal structure of LSD2 in complex with cis-4-Br-2,5-F2-PCPA (S1024)monomer46-822
100.0ZN;FAD;8A2;FLC;PG4;EDO;
Crystal structure of LSD2 in complex with trans-4-Br-PCPAmonomer47-822
100.0ZN;FAD;DIJ;FLC;PGE;GOL;
Crystal structure of LSD2 in complex with cis-4-Br-PCPAmonomer47-822
100.0ZN;FAD;DIJ;FLC;PGE;GOL;
Native structure of LSD2/AOF1/KDM1b in spacegroup of I222 at 2.9Amonomer48-822
100.0ZN;FAD;K;
Native structure of LSD2 /AOF1/KDM1b in spacegroup of C2221 at 2.13Amonomer49-822
100.0ZN;FAD;FLC;
Crystal structure of LSD2monomer51-821
100.0FAD;CL;NA;ZN;

2 SWISS-MODEL models

TemplateOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
7xe1.1.Amonomer0.9047-822
ZN;FAD;FLC;100.00
8bop.1.Amonomer0.68279-821
35.98

2 SWISS-MODEL models built on isoform sequence

IsoformTemplateOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
Isoform 27xe1.1.Amonomer0.8647-590
ZN;FAD;99.10
Isoform 47xe1.1.Amonomer0.941-175
100.00