Q8NB78 (KDM1B_HUMAN) Homo sapiens (Human)

Lysine-specific histone demethylase 1B UniProtKBInterProSTRINGInteractive Modelling

822 aa; Sequence (Fasta) ; (Isoform 2; Isoform 4; )

Sequence Features

 53Zinc 1
 58Zinc 1
 65Zinc 2
 73Zinc 2
 84Zinc 1; via pros nitrogen
 90Zinc 1; via tele nitrogen
 92Zinc 2
 95Zinc 2
 142Zinc 3
 147Zinc 3
 169Zinc 3
 185Zinc 3
 133-193CW-type
 383-439FAD
 803-805FAD
 138-190Zinc finger, CW-type
IPR011124PF07496
 290-363SWIRM domain
IPR007526PF04433
 393-819Amine oxidase
IPR002937PF01593

Sequence Alignments

Experimental structures

DescriptionOligo-stateLigandsStructureRangeDownloadAssess
Complex structure of LSD2/AOF1/KDM1b with H3K4 mimic Heteromer
P68431;
ZN;FAD;4fwf50-822
Crystal structure of LSD2-NPAC with H3(1-26)in space group P21 Heteromer
Q49A26; Q92133;
ZN;FAD;4hsu51-822
Crystal structure of LSD2-NPAC with H3 in space group P3221 Heteromer
P84243; Q49A26;
GOL;ZN;IOD;FAD;4gus51-822
Crystal structure of LSD2-NPAC with H3 in space group P21 Heteromer
P84243; Q49A26;
GOL;ZN;FAD;4gur51-822
Crystal structure of LSD2 with H3 Heteromer
P84243;
ZN;FAD;4gu051-822
Structure of LSD2/NPAC-linker/nucleosome core particle complex: Class 2 Heteromer
P02281; P06897; P62799; P84233; Q49A26;
ZN;FAD;6r1u51-822
Structure of LSD2/NPAC-linker/nucleosome core particle complex: Class 3 Heteromer
P02281; P06897; P62799; P84233; Q49A26;
ZN;FAD;6r2551-822
Crystal structure of LSD2-NPAC Heteromer
Q49A26;
GOL;ZN;PGE;FAD;4gut51-821
Crystal structure of LSD2-NPAC with tranylcypromine Heteromer
Q49A26;
ZN;FA9;4guu51-821
Native structure of LSD2/AOF1/KDM1b in spacegroup of I222 at 2.9Ahomo-2-mer PO4;ZN;K;FAD;4fwj48-822
Native structure of LSD2 /AOF1/KDM1b in spacegroup of C2221 at 2.13Ahomo-2-mer ZN;FLC;FAD;4fwe49-822
Crystal structure of LSD2homo-2-mer NA;ZN;FAD;CL;4gu151-821

Homology models built on isoform sequence

Isoform #Oligo-stateLigandsQMEANTemplateRangeSeq id (%)ReportDownloadAssess
4monomer-1.234gur.1.A1-175
100.00
2monomerZN;K;FAD;-0.884fwj.1.A48-590
98.22