Q8RQE8 (RPOC_THET8) Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)

DNA-directed RNA polymerase subunit beta' UniProtKBInterProSTRINGInteractive Modelling

1524 aa; Sequence (Fasta)

Available Structures

72 Experimental Structures

DescriptionOligo-stateLigandsStructureRange
Crystal structure of the T. Thermophilus RNA polymerase holoenzyme in complex with inhibitor tageti… Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE9; 		2×MG; 2×ZN; 1×TGT;
2be5
2-1505
Assess
Crystal structure of the T. thermophilus RNA polymerase holoenzyme in complex with antibiotic sterp… Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE9; 		1×STD; 2×ZN; 1×MG;
2a6h
2-1505
Assess
Crystal structure of the T. thermophilus RNA polymerase holoenzyme in complex with antibiotic rifab… Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE9; 		313×MG; 1×RBT; 2×ZN;
2a68
2-1505
Assess
Crystal structure of the T. Thermophilus RNA polymerase holoenzyme in complex with antibiotic rifap… Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE9; 		266×MG; 1×RPT; 2×ZN;
2a69
2-1505
Assess
Crystal structure of the T. thermophilus RNA polymerase elongation complex Heteromer
Q5SHR6; Q8RQE7; Q8RQE9; 		2×ZN; 1×MG;
2o5i
2-1505
Assess
Crystal structure of the RNA polymerase holoenzyme from Thermus thermophilus at 2.6A resolution Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE9; 		260×MG; 2×PB;
1iw7
2-1505
Assess
Crystal structure of the T. Thermophilus RNA polymerase holoenzyme in complex with antibiotic myxop… Heteromer
Q5SKW1; Q8RQE7; Q8RQE9; Q9Z9H6; 		2×ZN; 1×MXP; 1×MG;
3eql
2-1505
Assess
Structural basis for transcription regulation by alarmone ppGpp Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE9; 		359×MG; 2×ZN;
1smy
2-1505
Assess
Re-refinement of Thermus thermopiles DNA-directed RNA polymerase structure Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE9; 		1×PO4; 4×MG; 2×ZN; 1×G4P;
5tmc
2-1505
Assess
Crystal structure of the T. Thermophilus RNA polymerase holoenzyme Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE9; 		2×ZN; 1×MG;
2a6e
2-1505
Assess
Crystal structure of thermus thermophilus rna polymerase holoenzyme in complex with the antibiotic … Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE9; 		2×PO4; 2×MG; 2×MPD; 2×ZN; 1×NE6;
3dxj
2-1505
Assess
Crystal structure of the T. thermophilus RNAP polymerase elongation complex with the ntp substrate … Heteromer
Q5SHR6; Q8RQE7; Q8RQE9; 		1×STD; 2×ZN; 2×MG; 1×APC;
2ppb
2-1505
Assess
Structure of Thermus thermophilus RNA polymerase holoenzyme in complex with the antibiotic streptol… Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE9; 		1×STD; 2×ZN; 1×MG;
1zyr
2-1505
Assess
Crystal structure of the T. thermophilus RNAP polymerase elongation complex with the NTP substrate … Heteromer
Q5SHR6; Q8RQE7; Q8RQE9; 		2×ZN; 2×MG; 1×APC;
2o5j
2-1505
Assess
Re-refinement of thermus thermophilus RNA polymerase Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE9; 		2×PO4; 1×NE6; 2×ZN; 2×MG;
5tmf
2-1505
Assess
Crystal structure of Thermus thermophilus RNA polymerase holoenzyme at 3.3 angstroms resolution Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE9; 		2×ZN; 1×MG;
2cw0
2-1505
Assess
RNA polymerase-gp39 complex Heteromer
A7XX65; Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE9; 		1×ZN;
3wod
2-1505
Assess
T. thermophilus RNA polymerase holoenzyme bound with gp39 and gp76 Heteromer
A7XX65; A7XXA7; Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE9; 		1×ZN;
5xj0
2-1505
Assess
Thermus thermophilus RNA polymerase backtracked complex Heteromer
Q5SHR6; Q8RQE7; Q8RQE9; 		2×ZN;
4wqs
2-1505
Assess
Thermus thermophilus initial transcription complex comprising sigma A and 5'-OH RNA of 5 nt Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE9; 		4×MG; 2×ZN;
6kqf
3-1502
Assess
X-ray crystal structure of a bacterial reiterative transcription complex of pyrG promoter variant -… Heteromer
Q5SHR6; Q72L95; Q8RQE7; Q8RQE9; 		2×MG; 1×POP; 2×ZN;
6ow3
3-1502
Assess
Thermus thermophilus initial transcription complex comprising sigma A and 5'-OH RNA of 6 nt Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE9; 		4×MG; 2×ZN;
6kqg
3-1502
Assess
X-ray crystal structure of bacterial RNA polymerase and pyrG promoter complex Heteromer
Q5SKW1; Q72I32; Q8RQE7; Q8RQE9; 		2×ZN; 3×MG;
5voi
3-1502
Assess
Crystal structure of Thermus thermophilus transcription initiation complex soaked with GE23077 Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE9; 		5×MG; 2×ZN; 1×MB8;
4oin
3-1502
Assess
Thermus thermophilus RNA polymerase transcription initiation complex containing a template-strand p… Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE9; 		5×MG; 2×ZN; 1×2TM;
7eh0
3-1502
Assess
X-ray crystal structure of a bacterial reiterative transcription complex of pyrG promoter variant -… Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE9; 		2×MG; 1×POP; 2×ZN;
6ovr
3-1502
Assess
Thermus thermophilus initial transcription complex comprising sigma A and 5'-triphosphate RNA of 4 … Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE9; 		2×ZN; 4×MG;
6kql
3-1502
Assess
Thermus thermophilus RNA polymerase de novo transcription initiation complex Heteromer
Q5SKW1; Q8RQE7; Q8RQE9; Q9Z9H6; 		1×ATP; 2×ZN; 3×MG; 1×2TM;
4q4z
3-1502
Assess
Crystal structure of Thermus thermophilus transcription initiation complex Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE9; 		5×MG; 2×ZN;
4g7h
3-1502
Assess
Thermus thermophilus transcription initiation complex containing a template-strand purine at positi… Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE9; 		5×MG; 2×BU1; 2×ZN; 1×2TM;
7eh1
3-1502
Assess
X-ray crystal structure of a bacterial reiterative transcription complex of pyrBI promoter Heteromer
Q5SHR6; Q72L95; Q8RQE7; Q8RQE9; 		2×MG; 2×ZN; 1×UTP;
6p71
3-1502
Assess
Crystal structure of Thermus thermophilus product complex for transcription initiation with NAD and… Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE9; 		5×MG; 2×ZN; 1×C; 1×CTP; 1×NAD;
5d4d
3-1502
Assess
Thermus thermophilus RNA polymerase initially transcribing complex with 3'dCTP Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE9; 		2×MG; 2×ZN; 1×CH1;
6woy
3-1502
Assess
X-ray crystal structure of a bacterial reiterative transcription complex of pyrG promoter at 7 min Heteromer
Q5SHR6; Q72L95; Q8RQE7; Q8RQE9; 		2×MG; 1×POP; 2×ZN;
6oy7
3-1502
Assess
X-ray crystal structure of bacterial RNA polymerase and pyrBI promoter complex Heteromer
Q5SHR6; Q72L95; Q8RQE7; Q8RQE9; 		3×MG; 2×ZN;
6p70
3-1502
Assess
Crystal structure of Thermus thermophilus product complex for transcription initiation with 3'-deph… Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE9; 		5×MG; 2×ZN; 1×C; 1×DPO; 1×COD;
5d4e
3-1502
Assess
X-ray crystal structure of a bacterial reiterative transcription complex of pyrG promoter at 5 min Heteromer
Q5SHR6; Q72L95; Q8RQE7; Q8RQE9; 		3×MG; 2×ZN; 1×GTP;
6oy6
3-1502
Assess
X-ray crystal structure of a bacterial reiterative transcription complex of pyrG promoter at 3 min Heteromer
A0A1J1EUF1; Q72L95; Q8RQE9; Q9Z9H6; 		3×MG; 2×ZN; 1×GTP;
6oy5
3-1502
Assess
Crystal structure of Thermus thermophilus RNA polymerase transcription initiation complex soaked wi… Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE9; 		4×MG; 1×RFV; 2×ZN; 1×MB8;
4oir
3-1502
Assess
Thermus thermophilus initial transcription complex comprising sigma A and 5'-triphosphate RNA of 2 … Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE9; 		5×MG; 2×ZN;
6l74
3-1502
Assess
Thermus thermophilus RNA polymerase initially transcribing complex with 2'dCTP Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE9; 		1×NA; 1×DCP; 1×MG; 2×ZN;
6wox
3-1502
Assess
Thermus thermophilus initial transcription complex comprising sigma A and 5'-OH RNA of 7 nt Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE9; 		4×MG; 2×ZN;
6kqh
3-1502
Assess
Thermus thermophilus initial transcription complex comprising sigma A and 5'-triphosphate RNA of 5 … Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE9; 		4×MG; 2×ZN;
6kqm
3-1502
Assess
T. thermophilus transcription initiation complex having a RRR discriminator sequence and a nontempl… Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE9; 		4×MG; 2×ZN;
5e17
3-1502
Assess
Crystal structure of Thermus thermophilus product complex for transcription initiation with ATP and… Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE9; 		5×MG; 2×ZN; 1×C; 1×CTP; 1×ATP;
5d4c
3-1502
Assess
Thermus thermophilus initial transcription complex comprising sigma A and 5'-OH RNA of 3 nt Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE9; 		4×MG; 2×ZN; 1×DG;
6kqd
3-1502
Assess
T. thermophilus transcription initiation complex having a YYY discriminator sequence and a nontempl… Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE9; 		4×MG; 2×ZN;
5e18
3-1502
Assess
Thermus thermophilus initial transcription complex comprising sigma A and 5'-OH RNA of 4 nt Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE9; 		3×MG; 2×ZN;
6kqe
3-1502
Assess
X-ray crystal structure of a bacterial reiterative transcription complex of pyrG promoter Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE9; 		2×MG; 1×POP; 2×ZN;
5vo8
3-1502
Assess
Thermus thermophilus transcription initiation complex containing a template-strand pyrimidine at po… Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE9; 		2×ZN; 1×MG;
7eh2
3-1502
Assess
Crystal structure of Thermus thermophilus transcription initiation complex with GpA and CMPcPP Heteromer
Q5SHR6; Q72ID6; Q72L95; Q8RQE9; 		6×MG; 2×ZN; 1×2TM;
5x22
3-1502
Assess
Crystal structure of Thermus thermophilus transcription initiation complex soaked with GE23077, ATP… Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE9; 		6×MG; 2×ZN; 1×ATP; 1×MB8;
4oip
3-1502
Assess
Crystal structure of Thermus thermophilus transcription initiation complex comprising a truncated s… Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE9; 		5×MG; 2×ZN;
6lts
3-1502
Assess
Thermus thermophilus initial transcription complex comprising sigma A and 5'-triphosphate RNA of 6 … Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE9; 		4×MG; 2×ZN;
6kqn
3-1502
Assess
Crystal structure of Thermus thermophilus transcription initiation complex soaked with GE23077 and … Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE9; 		2×ZN; 4×MG; 1×MB8;
4oiq
3-1502
Assess
Crystal structure of T. thermophilus TTHB099 class II transcription activation complex: TAP-RPo Heteromer
Q53W63; Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE9; 		2×ZN; 1×MG;
5i2d
3-1502
Assess
CryoEM structure of Thermus thermophilus RNA polymerase elongation complex Heteromer
Q5SHR6; Q8RQE7; Q8RQE9; 		2×ZN; 1×MG;
6m6c
3-1502
Assess
Cryo-EM structure of Thermus thermophilus Mfd in complex with RNA polymerase and ATP-gamma-S Heteromer
Q5SHR6; Q72KB4; Q8RQE7; Q8RQE9; 		2×ZN; 1×MG; 1×AGS;
6m6b
3-1502
Assess
Cryo-EM structure of Thermus thermophilus Mfd in complex with RNA polymerase Heteromer
Q5SHR6; Q72KB4; Q8RQE7; Q8RQE9; 		2×ZN; 1×MG;
6m6a
3-1502
Assess
X-ray crystal structure of a bacterial reiterative transcription complex of pyrG promoter variant -… Heteromer
Q5SHR6; Q72L95; Q8RQE7; Q8RQE9; 		1×POP; 1×MG; 2×ZN;
6ovy
4-1502
Assess
Thermus thermophilus RNA polymerase initially transcribing complex containing 6-mer RNA Heteromer
Q5SKW1; Q8RQE7; Q8RQE9; Q9Z9H6; 		1×MG; 2×ZN; 1×ATP;
4q5s
4-1502
Assess
RNA polymerase-Gfh1 complex (Crystal type 2) Heteromer
Q5SHR6; Q5SJG6; Q8RQE7; Q8RQE9; 		1×ZN; 1×MG;
3aoi
1-1499
Assess
Thermus thermophilus RNA polymerase complexed with an RNA cleavage stimulating factor (a GreA/Gfh1 … Heteromer
Q5SHR6; Q5SJG6; Q5SKM1; Q8RQE7; Q8RQE9; 		1×ZN; 1×MG;
4wqt
1-1499
Assess
Crystal structure of Thermus thermophilus RNA polymerase holoenzyme in complex with GE23077 Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE9; 		2×ZN; 1×MG; 1×MB8;
4mq9
2-1499
Assess
Crystal structures of bacterial RNA Polymerase paused elongation complexes Heteromer
Q5SHR6; Q8RQE7; Q8RQE9; 		2×ZN; 1×MG;
4gzy
2-1499
Assess
RNA polymerase-Gfh1 complex (Crystal type 1) Heteromer
Q5SHR6; Q5SJG6; Q8RQE7; Q8RQE9; 		1×ZN; 1×MG;
3aoh
2-1499
Assess
Crystal structures of bacterial RNA Polymerase paused elongation complexes Heteromer
Q5SHR6; Q8RQE7; Q8RQE9; 		2×ZN; 1×MG;
4gzz
2-1499
Assess
Crystal structure of Thermus thermophilus RNA polymerase core enzyme Heteromer
Q5SHR6; Q8RQE7; Q8RQE9; 		2×ZN; 1×MG;
6asg
3-1499
Assess
Crystal structure of Thermus thermophilus transcription initiation complex containing 2 nt of RNA Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE9; 		2×ZN; 2×MG;
4g7o
3-1498
Assess
Crystal structure of Thermus thermophilus pre-insertion substrate complex for de novo transcription… Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE9; 		2×ZN; 2×MG; 1×ATP; 1×2TM;
4oio
3-1498
Assess
Crystal structure of Thermus thermophilus transcription initiation complex with GpA and pseudouridi… Heteromer
Q5SHR6; Q72ID6; Q72L95; Q8RQE9; 		6×MG; 2×ZN; 1×PUM;
5x21
3-1498
Assess
Crystal structure of Thermus thermophilus transcription initiation complex containing 5-BrU at temp… Heteromer
Q5SHR6; Q5SKW1; Q8RQE7; Q8RQE9; 		2×ZN; 1×MG;
4g7z
3-1498
Assess

4 Homology models

Oligo-stateLigandsQMEANDisCoTemplateRangeSeq id (%)
monomer2×MG; 2×ZN;0.824g7h.1.D3-1502
100.00
Assess
monomer1×ZN;0.713aoh.1.D2-1499
100.00
Assess
monomer0.626xas.1.I451-1335
51.38
Assess
monomer2×ZN;0.606dve.1.D2-1491
50.36
Assess

Alignments