Q92834 (RPGR_HUMAN) Homo sapiens (Human)

X-linked retinitis pigmentosa GTPase regulator UniProtKBInterProSTRINGInteractive Modelling

1020 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3; Isoform 4; Isoform 5; Isoform 6; )

Molecule Processing
X-linked retinitis pigmentosa GTPase regulator

Sequence Features

 43G -> E (in RP3; dbSNP:rs62638630) VAR_018057 dbSNP
 43G -> R (in RP3; dbSNP:rs62638629) VAR_018058 dbSNP
 60G -> V (in RP3; dbSNP:rs62638634) VAR_008501 dbSNP
 75I -> V (in RP3; unknown pathological significance; dbSNP:rs111631988) VAR_008503 dbSNP
 76S -> I (in dbSNP:rs1801685) VAR_013624 dbSNP
 98H -> Q (in RP3; reduces interaction with PDE6D; dbSNP:rs62638636) VAR_008504 dbSNP
 99T -> N (in RP3; dbSNP:rs62638637) VAR_013625 dbSNP
 127R -> G (in RP3; dbSNP:rs62638643) VAR_018059 dbSNP
 130F -> C (in RP3; reduces interaction with PDE6D; dbSNP:rs62638644) VAR_006850 dbSNP
 152S -> L (in RP3) VAR_025949
 173G -> R (in RP3 and RPDSI; dbSNP:rs137852550) VAR_018060 dbSNP
 184Q -> H (in dbSNP:rs5963403) VAR_033259 dbSNP
 215G -> V (in RP3; reduces interaction with PDE6D; dbSNP:rs62650218) VAR_008505 dbSNP
 235P -> S (in RP3; reduces interaction with PDE6D; dbSNP:rs62638651) VAR_006851 dbSNP
 250C -> R (in RP3; reduces interaction with PDE6D; dbSNP:rs62650220) VAR_008506 dbSNP
 250C -> Y (in RP3) VAR_018061
 258Missing (in RP3) VAR_018062
 262A -> G (in RP3; unknown pathological significance; dbSNP:rs138018739) VAR_008507 dbSNP
 267G -> E (in RP3) VAR_018063
 267G -> R (in RP3) VAR_026127
 275G -> S (in RP3; reduces interaction with PDE6D; dbSNP:rs62642057) VAR_006852 dbSNP
 285E -> G (in RP3) VAR_026128
 289I -> V (in RP3; dbSNP:rs62640587) VAR_013626 dbSNP
 302C -> R (in RP3; dbSNP:rs62640589) VAR_011561 dbSNP
 302C -> Y (in RP3; dbSNP:rs62640590) VAR_018064 dbSNP
 312D -> N (in RP3) VAR_018065
 312D -> Y (in RP3) VAR_018066
 320G -> R (in RP3; impairs protein folding; dbSNP:rs62640593) VAR_018067 dbSNP
 345N -> D (rare polymorphism; dbSNP:rs41305223) VAR_018068 dbSNP
 425R -> K (in dbSNP:rs1801687) VAR_008508 dbSNP
 431I -> V (in dbSNP:rs62635003) VAR_008509 dbSNP
 436G -> D (in RP3; dbSNP:rs62635004) VAR_008510 dbSNP
 526Missing VAR_011562
 533T -> M (in dbSNP:rs41312104) VAR_011563 dbSNP
 566G -> E (in dbSNP:rs1801688) VAR_008511 dbSNP
 296-300Missing (in RP3) VAR_013627
 55-101Regulator of chromosome condensation, RCC1
IPR000408PF00415
 106-155Regulator of chromosome condensation, RCC1
IPR000408PF00415
 158-205Regulator of chromosome condensation, RCC1
IPR000408PF00415
 208-258Regulator of chromosome condensation, RCC1
IPR000408PF00415
 262-310Regulator of chromosome condensation, RCC1
IPR000408PF00415
 314-363Regulator of chromosome condensation, RCC1
IPR000408PF00415

Sequence Alignments

Experimental structures

DescriptionOligo-stateLigandsStructureRangeDownloadAssess
Crystal Structure of the RPGR RCC1-like domain in complex with the RPGR-interacting domain of RPGRIā€¦ Heteromer
Q96KN7;
MG;GOL;4qam6-369
The crystal structure of the RPGR RCC1-like domain in complex with PDE6D Heteromer
O43924;
4jhp7-368
The crystal structure of the RPGR RCC1-like domainmonomer 4jhn8-369

Homology models

Oligo-stateLigandsQMEANTemplateRangeSeq id (%)DownloadAssess
monomer -3.825gwn.1.A46-454
26.02

Homology models built on isoform sequence

Isoform #Oligo-stateLigandsQMEANTemplateRangeSeq id (%)ReportDownloadAssess
5monomer1.074jhn.1.A8-369
100.00
3monomer1.064jhn.1.A8-369
100.00
2monomer1.054jhn.1.A8-369
100.00
4monomer0.554jhn.1.A8-367
94.49
2monomer-3.855gwn.1.A46-454
26.02
6monomer1.074jhn.1.A8-369
100.00