Q96KN7 (RPGR1_HUMAN) Homo sapiens (Human)

X-linked retinitis pigmentosa GTPase regulator-interacting protein 1 UniProtKBInterProSTRINGInteractive Modelling

1286 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3; Isoform 4; Isoform 5; Isoform 6; )

Sequence Features

 32M -> L VAR_065720
 96P -> Q (in dbSNP:rs1040904) VAR_057772 dbSNP
 135S -> R VAR_065721
 192K -> E (in dbSNP:rs6571751) VAR_017830 dbSNP
 318A -> V (in a patient with primary open angle glaucoma; dbSNP:rs1325466987) VAR_065722 dbSNP
 363R -> T (in a patient with normal tension glaucoma) VAR_065723
 432S -> F (found in a patient with LCA6; dbSNP:rs190985984) VAR_067184 dbSNP
 547A -> S (in CORD13; dbSNP:rs10151259) VAR_017831 dbSNP
 585P -> S (in dbSNP:rs147586703) VAR_065724 dbSNP
 589Q -> H (does not affect the interaction with NPHP4; dbSNP:rs34067949) VAR_065725 dbSNP
 598R -> Q (found in patients with primary open angle glaucoma and juvenile open angle glaucoma; affects the interaction with NPHP4; dbSNP:rs74034910) VAR_065726 dbSNP
 601S -> L (in dbSNP:rs3748360) VAR_017832 dbSNP
 601S -> W (found in a patient with LCA6; dbSNP:rs3748360) VAR_067185 dbSNP
 603C -> S VAR_065727
 631H -> P (in LCA6) VAR_067186
 635A -> G (in a patient with normal tension glaucoma and a patient with primary open angle glaucoma; affects the interaction with NPHP4; dbSNP:rs200325360) VAR_065728 dbSNP
 638T -> I (in dbSNP:rs1010290273) VAR_065729 dbSNP
 746G -> E (in LCA6; dbSNP:rs61751268) VAR_017833 dbSNP
 764A -> V (does not affect the interaction with NPHP4; dbSNP:rs758652031) VAR_065730 dbSNP
 806T -> I (in a patient with primary open angle glaucoma who also carries variant K-352 in MYOC; affects the interaction with NPHP4; dbSNP:rs142796310) VAR_065731 dbSNP
 812R -> H (does not affect the interaction with NPHP4) VAR_065732
 814R -> L (in dbSNP:rs372647080) VAR_065733 dbSNP
 827R -> L (in CORD13; dbSNP:rs28937883) VAR_017834 dbSNP
 837A -> G (in a patient with primary open angle glaucoma and a patient with juvenile open angle glaucoma; affects the interaction with NPHP4; dbSNP:rs373515194) VAR_065734 dbSNP
 838I -> V (in a patient with normal tension glaucoma and a patient with primary open angle glaucoma; affects the interaction with NPHP4; dbSNP:rs772480252) VAR_065735 dbSNP
 841A -> T VAR_065736
 852R -> Q (in dbSNP:rs181758389) VAR_065737 dbSNP
 876D -> G (impairs interaction with NPHP4; dbSNP:rs61751274) VAR_076792 dbSNP
 883G -> D VAR_065738
 960A -> P (in dbSNP:rs35810926) VAR_057773 dbSNP
 1033E -> Q (in dbSNP:rs3748361) VAR_017835 dbSNP
 1057H -> L (found in a patient associated with LCA6; dbSNP:rs201521970) VAR_067187 dbSNP
 1114D -> G (in LCA6; no effect on interaction with RPGR; dbSNP:rs17103671) VAR_017836 dbSNP
 1130E -> Q (found in a patient with LCA6) VAR_067188
 1211V -> E (in LCA6) VAR_076823
 1240G -> E (in dbSNP:rs34725281) VAR_057774 dbSNP
 619-757RPGR-interacting protein 1, first C2 domain
IPR021656PF11618
 801-908C2 domain
IPR000008PF00168
 1114-1279RPGRIP1, C-terminal
IPR041091PF18111

Sequence Alignments

Experimental structures

DescriptionOligo-stateLigandsStructureRangeDownloadAssess
Crystal Structure of the RPGR RCC1-like domain in complex with the RPGR-interacting domain of RPGRIā€¦ Heteromer
Q92834;
MG;GOL;4qam1097-1283

Homology models

Oligo-stateLigandsQMEANTemplateRangeSeq id (%)DownloadAssess
monomer -4.704npj.1.A624-931
14.13
monomer -0.396ian.2.B318-547
18.41
monomer -0.112v71.1.B280-431
23.03
monomer -1.572v71.1.A280-431
23.03
monomer -2.936jlb.1.C311-551
15.05

Homology models built on isoform sequence

Isoform #Oligo-stateLigandsQMEANTemplateRangeSeq id (%)ReportDownloadAssess
2monomer-0.184qam.1.B480-666
100.00
3monomer-0.184qam.1.B456-642
100.00
4monomer-0.234qam.1.B423-609
100.00
5monomer-0.234qam.1.B713-899
100.00
4monomer-0.995y05.1.A34-221
8.82
6monomer-1.504ilo.1.A21-192
9.87
4monomer-1.396igv.1.A46-173
32.04
5monomer-1.904ilo.2.A21-192
9.87
5monomer0.396jlb.1.A19-183
17.09
6monomer-4.964npj.1.A240-546
14.18
6monomer-2.843vkg.1.A21-181
17.65
5monomer-4.714npj.1.A240-547
13.75
2monomer-4.974npj.1.A7-314
13.75
6monomer-1.036snz.1.A19-178
18.94
5monomer-1.015xg2.1.A19-167
14.29
4monomer-2.303o0z.2.A50-197
17.73
4monomer-3.636ian.1.A46-225
15.75
6monomer-3.296l5j.2.A19-185
15.91
4monomer-2.673vkg.1.A143-261
18.26