Q96KN7 (RPGR1_HUMAN) Homo sapiens (Human)

X-linked retinitis pigmentosa GTPase regulator-interacting protein 1 UniProtKBInterProSTRINGInteractive Modelling

1286 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3; Isoform 4; Isoform 5; Isoform 6; )

Sequence Features

 32M -> L. VAR_065720
 96P -> Q (in dbSNP:rs1040904). VAR_057772 dbSNP
 135S -> R. VAR_065721
 192K -> E (in dbSNP:rs6571751). VAR_017830 dbSNP
 318A -> V (in a patient with primary open angle glaucoma; dbSNP:rs1325466987). VAR_065722 dbSNP
 363R -> T (in a patient with normal tension glaucoma). VAR_065723
 432S -> F (found in a patient with LCA6; dbSNP:rs190985984). VAR_067184 dbSNP
 547A -> S (in CORD13; dbSNP:rs10151259). VAR_017831 dbSNP
 585P -> S (in dbSNP:rs147586703). VAR_065724 dbSNP
 589Q -> H (does not affect the interaction with NPHP4; dbSNP:rs34067949). VAR_065725 dbSNP
 598R -> Q (found in patients with primary open angle glaucoma and juvenile open angle glaucoma; affects the interaction with NPHP4; dbSNP:rs74034910). VAR_065726 dbSNP
 601S -> L (in dbSNP:rs3748360). VAR_017832 dbSNP
 601S -> W (found in a patient with LCA6; dbSNP:rs3748360). VAR_067185 dbSNP
 603C -> S. VAR_065727
 631H -> P (in LCA6). VAR_067186
 635A -> G (in a patient with normal tension glaucoma and a patient with primary open angle glaucoma; affects the interaction with NPHP4; dbSNP:rs200325360). VAR_065728 dbSNP
 638T -> I (in dbSNP:rs1010290273). VAR_065729 dbSNP
 746G -> E (in LCA6; dbSNP:rs61751268). VAR_017833 dbSNP
 764A -> V (does not affect the interaction with NPHP4; dbSNP:rs758652031). VAR_065730 dbSNP
 806T -> I (in a patient with primary open angle glaucoma who also carries variant K-352 in MYOC; affects the interaction with NPHP4; dbSNP:rs142796310). VAR_065731 dbSNP
 812R -> H (does not affect the interaction with NPHP4). VAR_065732
 814R -> L (in dbSNP:rs372647080). VAR_065733 dbSNP
 827R -> L (in CORD13; dbSNP:rs28937883). VAR_017834 dbSNP
 837A -> G (in a patient with primary open angle glaucoma and a patient with juvenile open angle glaucoma; affects the interaction with NPHP4; dbSNP:rs373515194). VAR_065734 dbSNP
 838I -> V (in a patient with normal tension glaucoma and a patient with primary open angle glaucoma; affects the interaction with NPHP4; dbSNP:rs772480252). VAR_065735 dbSNP
 841A -> T. VAR_065736
 852R -> Q (in dbSNP:rs181758389). VAR_065737 dbSNP
 876D -> G (impairs interaction with NPHP4; dbSNP:rs61751274). VAR_076792 dbSNP
 883G -> D. VAR_065738
 960A -> P (in dbSNP:rs35810926). VAR_057773 dbSNP
 1033E -> Q (in dbSNP:rs3748361). VAR_017835 dbSNP
 1057H -> L (found in a patient associated with LCA6; dbSNP:rs201521970). VAR_067187 dbSNP
 1114D -> G (in LCA6; no effect on interaction with RPGR; dbSNP:rs17103671). VAR_017836 dbSNP
 1130E -> Q (found in a patient with LCA6). VAR_067188
 1211V -> E (in LCA6). VAR_076823
 1240G -> E (in dbSNP:rs34725281). VAR_057774 dbSNP
 619-757RPGR-interacting protein 1, first C2 dom ain
IPR021656PF11618
 801-908C2 domain
IPR000008PF00168
 1114-1279RPGRIP1, C-terminal
IPR041091PF18111

Sequence Alignments

Experimental structures

DescriptionOligo-stateLigandsStructureRangeDownloadAssess
'Crystal Structure of the RPGR RCC1-like domain in complex with the RPGR-interacting domain of RP... Heteromer
Q92834;
GOL;MG;4qam1097-1283

Homology models

Oligo-stateLigandsQMEANTemplateRangeSeq id (%)ReportDownloadAssess
monomer -3.566k1z.1.A318-464
17.32
monomer -0.092v71.1.B280-431
23.03
monomer -1.562v71.1.A280-431
23.03
monomer -0.706ian.2.B318-547
18.41
monomer -4.914npj.1.A624-931
14.13

Homology models built on isoform sequence

Isoform #Oligo-stateLigandsQMEANTemplateRangeSeq id (%)ReportDownloadAssess
4monomer-2.796f1t.1.U57-164
18.48
4monomer-1.903vkg.1.A143-261
18.26
4monomer-2.303o0z.2.A50-197
17.73
5monomer-1.015xg2.1.A19-167
14.29
5monomer-1.904ilo.2.A21-192
9.87
6monomer-2.413vkg.1.A21-181
17.65
6monomer-1.784ilo.1.A21-192
9.87
2monomer-0.054qam.1.B480-666
100.00
3monomer-0.054qam.1.B456-642
100.00
4monomer-0.114qam.1.B423-609
100.00
4monomer-3.866ian.1.A46-225
15.75
5monomer-0.104qam.1.B713-899
100.00
4monomer-1.005y05.1.A34-221
8.82
2monomer-4.484npj.1.A7-314
13.75
5monomer-4.924npj.1.A240-547
13.75
6monomer-4.934npj.1.A240-546
14.18