Q99836 | SWISS-MODEL Repository

Q99836 (MYD88_HUMAN) Homo sapiens (Human)

Myeloid differentiation primary response protein MyD88 UniProtKB InterPro STRING Interactive Modelling

296 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3; Isoform 4; Isoform 5; Isoform 6)

It is possible new templates exist for this target since these models were created.

Available Structures

9 Experimental Structures

	Description	PDB ID	Oligo-state	Range	Seq id (%)	Ligands
	The ternary Death Domain complex of MyD88, IRAK4, and IRAK2	3mop PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O43187; Q9NWZ3;	20-117	100
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	Helical MyD88 death domain filament	6i3n PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-13-mer	19-121	100
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	Solution NMR structure of human myeloid differentiation primary response (MyD88). Northeast Structu…	2js7 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	146-296	100
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	Solution structure of the TIR domain of human MyD88	2z5v PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	156-296	100
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	Crystal structure of the TIR domain of human myeloid differentiation primary response protein 88.	4eo7 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	157-296	100	1×MG;
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	Crystal Structure of the TIR-domain of Human Myeloid Differentiation Primary Response protein (MyD8…	4dom PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	157-296	100
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	SFX structure of the MyD88 TIR domain higher-order assembly (solved, rebuilt and refined using an i…	7ber PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	159-296	100
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	SFX structure of the MyD88 TIR domain higher-order assembly	7l6w PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	159-296	100
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	MicroED structure of the MyD88 TIR domain higher-order assembly	7beq PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	159-296	100
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2 SWISS-MODEL models

	Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
	6i3n.1.A	monomer	0.79	19-121		100.00
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	2js7.1.A	monomer	0.67	147-296		100.00
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	Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

	Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

9 SWISS-MODEL models built on isoform sequence

	Isoform	Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
	Isoform 2	6i3n.1.A	monomer	0.79	19-109		100.00
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	Isoform 2	7beq.1.A	monomer	0.75	114-251		99.30
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	Isoform 3	6i3n.1.A	homo-13-mer	0.82	19-121		100.00
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	Isoform 4	6i3n.1.A	homo-13-mer	0.86	19-118		92.11
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	Isoform 5	3mop.1.F	monomer	0.79	1-96		98.96
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	Isoform 5	2js7.1.A	monomer	0.67	125-275		100.00
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	Isoform 6	6i3n.1.A	monomer	0.78	19-121		100.00
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	Isoform 6	4eo7.1.A	monomer	0.73	157-304		99.29
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	Isoform 6	1tlh.1.B	monomer	0.54	22-65		22.73
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Alignments