Q9GZS3 (SKI8_HUMAN) Homo sapiens (Human)

Superkiller complex protein 8 UniProtKBInterProSTRINGInteractive Modelling

305 aa; Sequence (Fasta) ; 21 identical sequences

Available Structures

22 Experimental Structures

DescriptionPDB IDOligo-stateRangeSeq id (%)Ligands
Apo human SKI complex in the open state Heteromer
Q15477; Q6PGP7;
1-305
100
RNA-bound human SKI complex Heteromer
Q15477; Q6PGP7;
1-305
100
80S-bound human SKI complex in the closed state Heteromer
Q15477; Q6PGP7;
1-305
100
Apo human SKI complex in the closed state Heteromer
Q15477; Q6PGP7;
1-305
100
40S-bound human SKI238 complex in the open state (Gatekeeping module) Heteromer
Q15477; Q6PGP7;
1-305
100
human 40S ribosome bound by a SKI238-exosome complex Heteromer
P08708; P08865; P15880; P23396; P25398; P39019; P42677; P46781; P46782; P46783; P60866; P61247; P62081; P62241; P62244; P62249; P62263; P62266; P62269; P62273; P62277; P62280; P62701; P62753; P62841; P62847; P62851; P62854; P62857; P62861; P62945; P62979; P63220; P63244; Q06265; Q13868; Q15024; Q15477; Q5RKV6; Q6PGP7; Q8TF46; Q96B26; Q9NPD3; Q9NQT4; Q9NQT5; Q9Y3B2;
1-305
100
human SKI7-SKI238 complex in the open state Heteromer
Q15477; Q6PGP7; Q9Y450;
1-305
100
Pol II-CSB-CRL4CSA-UVSSA-SPT6-PAF (Structure 4) Heteromer
A0A4X1TRS6; A0A4X1VEK9; A0A4X1VM56; A0A4X1VYD0; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P11414; P60899; P62878; Q03468; Q13216; Q13619; Q16531; Q2YD98; Q6P1J9; Q6PD62; Q7KZ85; Q8N7H5; Q8WVC0;
5-304
100ZN;MG;
Pol II-DSIF-SPT6-PAF1c-TFIIS complex with rewrapped nucleosome Heteromer
A0A481DF93; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A7M4DUC2; A0A8D1GCS3; O00267; P02281; P23193; P62799; P84233; Q6AZJ8; Q6P1J9; Q6PD62; Q7KZ85; Q8N7H5; Q8WVC0; Q92541;
5-304
100ZN;MG;
Structure of activated transcription complex Pol II-DSIF-PAF-SPT6 Heteromer
A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LJR4; I3LSI7; O00267; P60899; P63272; Q6PD62; Q7KZ85;
5-304
100ZN;MG;
Pol II-CSB-CSA-DDB1-UVSSA-PAF-SPT6 (Structure 3) Heteromer
A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VYD0; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P11414; P60899; Q03468; Q13216; Q16531; Q2YD98; Q6P1J9; Q6PD62; Q7KZ85; Q8N7H5; Q8WVC0;
5-304
100ZN;MG;
Pol II-CSB-CRL4CSA-UVSSA-SPT6-PAF (Structure 5) Heteromer
A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VYD0; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P11414; P60899; P62878; Q03468; Q13216; Q13619; Q16531; Q2YD98; Q6P1J9; Q6PD62; Q7KZ85; Q8N7H5; Q8WVC0;
5-304
100ZN;MG;
Pol II-DSIF-SPT6-PAF1c-TFIIS-nucleosome complex (stalled at +38) Heteromer
A0A481DF93; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A7M4DUC2; A0A8D1GCS3; O00267; P02281; P23193; P62799; P63272; P84233; Q6AZJ8; Q6P1J9; Q6PD62; Q7KZ85; Q8N7H5; Q8WVC0; Q92541;
5-304
100ZN;MG;
Structure of complete, activated transcription complex Pol II-DSIF-PAF-SPT6 uncovers allosteric elo… Heteromer
A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VYD0; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O00267; P60899; P63272; Q6P1J9; Q6PD62; Q7KZ85; Q8N7H5; Q8WVC0; Q92541;
5-304
100ZN;MG;
Structure of mammalian Pol II-DSIF-SPT6-PAF1-TFIIS-hexasome elongation complex Heteromer
A0A287ADR4; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VYD0; A0A7M4DUC2; A0A8D0JYF1; A0A8J1LZU9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O00267; P60899; P62799; P63272; P84233; Q6AZJ8; Q6P1J9; Q6PD62; Q7KZ85; Q8N7H5; Q8WVC0; Q92541;
5-304
100ZN;MG;
RNA polymerase II-DSIF-SPT6-PAF1c-TFIIS-IWS1-SETD2-nucleosome, bp +27 Heteromer
A0A310TTQ1; A0A481DF93; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A7M4DUC2; A0A8D0TE17; A0A8D1AQR7; A0A8W4F9W9; O00267; P02281; P06897; P23193; P60899; P62799; P63272; Q6P1J9; Q6PD62; Q7KZ85; Q8N7H5; Q8WVC0; Q92541; Q96ST2; Q9BYW2;
5-304
10012×ZN;MG;
RNA polymerase II-DSIF-SPT6-PAF1c-TFIIS-IWS1-SETD2-nucleosome, 30 bp upstream Heteromer
A0A310TTQ1; A0A481DF93; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A7M4DUC2; A0A8D0TE17; A0A8D1AQR7; A0A8W4F9W9; O00267; P02281; P06897; P23193; P60899; P62799; P63272; Q6P1J9; Q6PD62; Q7KZ85; Q8N7H5; Q8WVC0; Q92541; Q96ST2; Q9BYW2;
5-304
100ZN;MG;
RNA polymerase II-DSIF-SPT6-PAF1c-TFIIS-IWS1-SETD2-FACT nucleosome upstream Heteromer
A0A310TTQ1; A0A481DF93; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A7M4DUC2; A0A8D0TE17; A0A8D1AQR7; A0A8W4F9W9; O00267; P02281; P06897; P23193; P60899; P62799; P63272; Q08945; Q6P1J9; Q6PD62; Q7KZ85; Q8N7H5; Q8WVC0; Q92541; Q96ST2; Q9BYW2; Q9Y5B9;
5-304
100ZN;MG;
RNA polymerase II-DSIF-SPT6-PAF1c-TFIIS-IWS1-nucleosome, bp +27 Heteromer
A0A310TTQ1; A0A481DF93; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A7M4DUC2; A0A8D0TE17; A0A8D1AQR7; A0A8W4F9W9; O00267; P02281; P06897; P23193; P60899; P62799; P63272; Q6P1J9; Q6PD62; Q7KZ85; Q8N7H5; Q8WVC0; Q92541; Q96ST2;
5-304
100ZN;MG;
RNA polymerase II-DSIF-SPT6-PAF1c-TFIIS-IWS1-hexasome, bp +27 Heteromer
A0A310TTQ1; A0A481DF93; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A7M4DUC2; A0A8D0TE17; A0A8D1AQR7; A0A8W4F9W9; O00267; P02281; P06897; P23193; P60899; P62799; P63272; Q6P1J9; Q6PD62; Q7KZ85; Q8N7H5; Q8WVC0; Q92541; Q96ST2;
5-304
100ZN;MG;
RNA polymerase II-DSIF-SPT6-PAF1c-TFIIS-IWS1-SETD2-nucleosome, 20 bp upstream Heteromer
A0A310TTQ1; A0A481DF93; A0A4X1TVZ5; A0A4X1VKG7; A0A4X1VTX4; A0A8D0JYF1; A0A8D1DS11; A0A8D1QTB4; F1RKE4; I3LCB2; P02281; P06897; P23193; P60899; P62799; P63272; Q6P1J9; Q6PD62; Q92541; Q96ST2; Q9BYW2;
5-304
100ZN;MG;
Crystal Structure of the WD repeat-containing protein 61monomer5-304
100.0UNX;

4 SWISS-MODEL models

TemplateOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
7qdy.1.Cmonomer0.871-305
100.00
2ymu.1.Amonomer0.773-302
33.33
2ymu.1.Amonomer0.754-303
30.56
6zqd.13.Amonomer0.685-304
22.82