Q9GZS3 (SKI8_HUMAN) Homo sapiens (Human)
Superkiller complex protein 8 UniProtKBInterProSTRINGInteractive Modelling
305 aa; Sequence (Fasta) ;
21 identical sequences
It is possible new templates exist for this target since these models were created.
Available Structures
16 Experimental Structures
| Description | PDB ID | Oligo-state | Range | Seq id (%) | Ligands | |
|---|---|---|---|---|---|---|
| Apo human SKI complex in the open state |
Heteromer Q15477; Q6PGP7; | 100 | ||||
| RNA-bound human SKI complex |
Heteromer Q15477; Q6PGP7; | 100 | ||||
| 80S-bound human SKI complex in the closed state |
Heteromer Q15477; Q6PGP7; | 100 | ||||
| Apo human SKI complex in the closed state |
Heteromer Q15477; Q6PGP7; | 100 | ||||
| 40S-bound human SKI238 complex in the open state (Gatekeeping module) |
Heteromer Q15477; Q6PGP7; | 100 | ||||
| human 40S ribosome bound by a SKI238-exosome complex |
Heteromer P08708; P08865; P15880; P23396; P25398; P39019; P42677; P46781; P46782; P46783; P60866; P61247; P62081; P62241; P62244; P62249; P62263; P62266; P62269; P62273; P62277; P62280; P62701; P62753; P62841; P62847; P62851; P62854; P62857; P62861; P62945; P62979; P63220; P63244; Q06265; Q13868; Q15024; Q15477; Q5RKV6; Q6PGP7; Q8TF46; Q96B26; Q9NPD3; Q9NQT4; Q9NQT5; Q9Y3B2; | 100 | ||||
| human SKI7-SKI238 complex in the open state |
Heteromer Q15477; Q6PGP7; Q9Y450; | 100 | ||||
| Pol II-CSB-CRL4CSA-UVSSA-SPT6-PAF (Structure 4) |
Heteromer A0A4X1TRS6; A0A4X1VEK9; A0A4X1VM56; A0A4X1VYD0; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P11414; P60899; P62878; Q03468; Q13216; Q13619; Q16531; Q2YD98; Q6P1J9; Q6PD62; Q7KZ85; Q8N7H5; Q8WVC0; | 100 | 8×ZN; 1×MG; | |||
| Pol II-DSIF-SPT6-PAF1c-TFIIS complex with rewrapped nucleosome |
Heteromer A0A481DF93; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A7M4DUC2; A0A8D1GCS3; O00267; P02281; P23193; P62799; P84233; Q6AZJ8; Q6P1J9; Q6PD62; Q7KZ85; Q8N7H5; Q8WVC0; Q92541; | 100 | 8×ZN; 1×MG; | |||
| Structure of mammalian Pol II-DSIF-SPT6-PAF1-TFIIS-hexasome elongation complex |
Heteromer A0A287ADR4; A0A4X1VKG7; A0A4X1VYD0; A0A7M4DUC2; A0A8D0JYF1; A0A8D1KNW4; A0A8J1LZU9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O00267; P60899; P62799; P84233; Q4R941; Q6AZJ8; Q6P1J9; Q6PD62; Q8N7H5; Q8WVC0; Q92541; | 100 | 9×ZN; 1×MG; | |||
| Structure of activated transcription complex Pol II-DSIF-PAF-SPT6 |
Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LJR4; I3LSI7; O00267; P60899; P63272; Q6PD62; Q7KZ85; | 100 | 9×ZN; 1×MG; | |||
| Pol II-CSB-CSA-DDB1-UVSSA-PAF-SPT6 (Structure 3) |
Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VYD0; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P11414; P60899; Q03468; Q13216; Q16531; Q2YD98; Q6P1J9; Q6PD62; Q7KZ85; Q8N7H5; Q8WVC0; | 100 | 8×ZN; 1×MG; | |||
| Pol II-CSB-CRL4CSA-UVSSA-SPT6-PAF (Structure 5) |
Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VYD0; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P11414; P60899; P62878; Q03468; Q13216; Q13619; Q16531; Q2YD98; Q6P1J9; Q6PD62; Q7KZ85; Q8N7H5; Q8WVC0; | 100 | 8×ZN; 1×MG; | |||
| Pol II-DSIF-SPT6-PAF1c-TFIIS-nucleosome complex (stalled at +38) |
Heteromer A0A481DF93; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A7M4DUC2; A0A8D1GCS3; O00267; P02281; P23193; P62799; P63272; P84233; Q6AZJ8; Q6P1J9; Q6PD62; Q7KZ85; Q8N7H5; Q8WVC0; Q92541; | 100 | 9×ZN; 1×MG; | |||
| Structure of complete, activated transcription complex Pol II-DSIF-PAF-SPT6 uncovers allosteric elo… |
Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VYD0; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O00267; P60899; P63272; Q6P1J9; Q6PD62; Q7KZ85; Q8N7H5; Q8WVC0; Q92541; | 100 | 9×ZN; 1×MG; | |||
| Crystal Structure of the WD repeat-containing protein 61 | monomer | 100.0 | 6×UNX; | |||
4 SWISS-MODEL models
| Template | Oligo-state | QMEAN | Range | Ligands | Trg-Tpl Seq id (%) | |
|---|---|---|---|---|---|---|
| 7qdy.1.C | monomer | 0.87 | 100.00 | |||
| 2ymu.1.A | monomer | 0.77 | 33.33 | |||
| 2ymu.1.A | monomer | 0.75 | 30.56 | |||
| 6zqd.13.A | monomer | 0.69 | 22.82 | |||