Q9NYV4 | SWISS-MODEL Repository

Q9NYV4 (CDK12_HUMAN) Homo sapiens (Human)

Cyclin-dependent kinase 12 UniProtKB Protein Atlas InterPro STRING Interactive Modelling

1490 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3)

It is possible new templates exist for this target since these models were created.

Available Structures

38 Experimental Structures

Description	PDB ID	Oligo-state	Range	Seq id (%)	Ligands
Structure of DDB1/Cdk12/Cyclin K with molecular glue SR-4835	9fmr PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O75909; Q16531;	714-1047	100	3×RMF;
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Structure of DDB1 bound to CR8-engaged CDK12-cyclinK	6td3 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O75909; Q16531;	715-1047	99.7	1×RC8;
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Structure of DDB1 bound to SR-4835-engaged CDK12-cyclin K	8bu5 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O75909; Q16531;	713-1044	99.7	1×SO4; 1×RMF; 1×CIT;
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Crystal structure of human Cdk12/Cyclin K in complex with ADP-aluminum fluoride	4nst PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O75909;	716-1046	100.0	2×ADP; 2×AF3; 7×MG; 4×EDO;
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Crystal structure of the human CDK12-cyclin K complex bound to AMPPNP	4cxa PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O75909;	718-1048	100
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Structure of DDB1 bound to DS17-engaged CDK12-cyclin K	8bu1 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O75909; Q16531;	715-1044	99.7	5×GOL; 1×RQL;
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Structure of DDB1 bound to DS22-engaged CDK12-cyclin K	8bu4 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O75909; Q16531;	715-1043	99.7	5×SO4; 1×RQL;
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Structure of DDB1 bound to Z7-engaged CDK12-cyclin K	8bud PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O75909; Q16531;	715-1043	99.7	10×SO4; 1×RP9;
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Structure of DDB1 bound to 21195-engaged CDK12-cyclin K	8bu7 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O75909; Q16531;	715-1043	99.7	1×EDO; 1×RS5; 10×SO4;
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Structure of DDB1 bound to Z11-engaged CDK12-cyclin K	8bue PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O75909; Q16531;	715-1043	99.7	12×SO4; 1×RVU;
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Structure of DDB1 bound to DS59-engaged CDK12-cyclin K	8bus PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O75909; Q16531;	715-1043	99.7	5×SO4; 1×RMX;
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Structure of DDB1 bound to DS16-engaged CDK12-cyclin K	8bun PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O75909; Q16531;	715-1041	99.69	10×SO4; 1×RNF;
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Structure of DDB1 bound to DS18-engaged CDK12-cyclin K	8bu2 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O75909; Q16531;	715-1041	99.69	12×SO4; 1×RVQ;
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Structure of DDB1 bound to dCeMM4-engaged CDK12-cyclin K	8bub PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O75909; Q16531;	715-1041	99.69	2×CIT; 1×RNU;
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Structure of DDB1 bound to DRF-053-engaged CDK12-cyclin K	8bui PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O75909; Q16531;	715-1041	99.69	1×EDO; 7×SO4; 1×RV6;
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Structure of DDB1 bound to HQ461-engaged CDK12-cyclin K	8bug PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O75909; Q16531;	715-1041	99.69	2×CIT; 1×RPW;
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Structure of DDB1 bound to DS06-engaged CDK12-cyclin K	8buj PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O75909; Q16531;	715-1041	99.69	5×SO4; 1×RUW;
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Structure of DDB1 bound to dCeMM3-engaged CDK12-cyclin K	8buc PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O75909; Q16531;	715-1041	99.69	4×SO4; 1×RKO;
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Crystal structure of human Cdk12/Cyclin K in complex with the inhibitor BSJ-01-175	7nxk PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O75909;	715-1040	100.0	1×UUB;
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Structure of DDB1 bound to DS15-engaged CDK12-cyclin K	8bum PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O75909; Q16531;	715-1040	99.69	11×SO4; 1×T6X;
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Structure of DDB1 bound to DS08-engaged CDK12-cyclin K	8buk PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O75909; Q16531;	715-1040	99.69	7×SO4; 1×RWE;
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Structure of DDB1 bound to DS19-engaged CDK12-cyclin K	8bu3 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O75909; Q16531;	715-1040	99.69	1×EDO; 6×SO4; 1×RSI;
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Structure of DDB1 bound to DS24-engaged CDK12-cyclin K	8buo PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O75909; Q16531;	715-1040	99.69	9×SO4; 1×RLC;
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Structure of DDB1 bound to DS50-engaged CDK12-cyclin K	8bur PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O75909; Q16531;	715-1040	99.69	7×SO4; 1×RQU;
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Crystal Structure of the Human Cdk12-Cyclink Complex	5acb PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O75909;	716-1040	100	1×5I1;
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Structure of DDB1 bound to 919278-engaged CDK12-cyclin K	8bua PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O75909; Q16531;	715-1039	99.69	2×CIT; 1×RVH;
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Structure of DDB1 bound to DS43-engaged CDK12-cyclin K	8buq PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O75909; Q16531;	715-1039	99.69	2×CIT; 1×RQ9;
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Structure of DDB1 bound to DS61-engaged CDK12-cyclin K	8but PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O75909; Q16531;	715-1039	99.69	7×SO4; 1×RQ5;
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Structure of DDB1 bound to DS11-engaged CDK12-cyclin K	8bul PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O75909; Q16531;	715-1039	99.69	1×EDO; 8×SO4; 1×RSU;
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Structure of DDB1 bound to roscovitine-engaged CDK12-cyclin K	8bu9 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O75909; Q16531;	715-1039	99.69	5×SO4; 1×RRC;
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Structure of DDB1 bound to WX3-engaged CDK12-cyclin K	8buh PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O75909; Q16531;	715-1039	99.69	5×SO4; 1×RR9;
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Structure of DDB1 bound to DS55-engaged CDK12-cyclin K	8bu6 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O75909; Q16531;	715-1038	99.69	2×SO4; 1×RQE;
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Crystal structure of human Cdk12/Cyclin K in complex with inhibitor SR-4835	8p81 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O75909;	716-1035	100	1×RMF;
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Crystal structure of human CDK12/CyclinK in complex with an inhibitor	6b3e PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O75909;	717-1036	100.0	1×MG; 1×CJM; 2×EDO;
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Structure of DDB1 bound to Z12-engaged CDK12-cyclin K	8buf PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O75909; Q16531;	715-1033	99.69	12×SO4; 1×RW6;
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Crystal structure of the human CDK12-cyclinK complex	4un0 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O75909;	719-1036	100.0
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Structure of DDB1 bound to DS30-engaged CDK12-cyclin K	8bup PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O75909; Q16531;	715-1027	99.68	11×SO4; 1×RWN;
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Structure of CDK12/CycK in complex with a small molecule inhibitor N-(4-(1-methyl-1H-pyrazol-4-yl)p…	6ckx PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O75909;	722-1024	100.0	2×MG; 1×8M1;
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1 SWISS-MODEL model

	Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
	9fmr.1.E	monomer	0.74	714-1042		100.00
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	Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

	Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

2 SWISS-MODEL models built on isoform sequence

Isoform	Template	Oligo-state	QMEANDisCo	Range	Trg-Tpl Seq id (%)
Isoform 2	9fmr.1.E	monomer	0.74	714-1042	100.00
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Isoform 3	9fmr.1.E	monomer	0.75	713-1041	100.00
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Q9NYV4 (CDK12_HUMAN) Homo sapiens (Human)

Cyclin-dependent kinase 12 UniProtKBProtein AtlasInterProSTRINGInteractive Modelling

Available Structures

38 Experimental Structures

1 SWISS-MODEL model

2 SWISS-MODEL models built on isoform sequence

Alignments

Background

Resolution

Cyclin-dependent kinase 12 UniProtKB Protein Atlas InterPro STRING Interactive Modelling