Q9NZ09 (UBAP1_HUMAN) Homo sapiens (Human)

Ubiquitin-associated protein 1 UniProtKBInterProSTRINGInteractive Modelling

502 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3; Isoform 4; ) Identical sequences: Homo sapiens: A0A6G6AA68

Sequence Features

Add
 357N -> K (in dbSNP:rs16935457) VAR_034577 dbSNP
 125-502Missing (in SPG80) VAR_082199
 176-502Missing (in SPG80; unknown pathological significance) VAR_082200

Sequence Alignments

Experimental structures

DescriptionOligo-stateLigandsStructureRange
Crystal Structure of HD-PTP phosphatase in complex with UBAP1 Heteromer
Q9H3S7;
5lm1262-271
Assess
The UBAP1 subunit of ESCRT-I interacts with ubiquitin via a novel SOUBA domainhomo-2-mer NHE;K;GOL;NA;4ae4389-500
Assess
Solution Structure of UBA domain of Human Ubiquitin Associated Protein 1 (UBAP1)monomer 1wgn381-430
Assess

Homology models

Oligo-stateQMEANTemplateRangeSeq id (%)Ligands
monomer -1.71 5x0w.3.A388-497
19.44
Assess
homo-4-mer -4.16 1c7y.1.9384-499
11.50
Assess
monomer -3.61 1ixr.1.B385-499
13.27
Assess
monomer -3.79 6zqe.1.2388-500
14.95
Assess

Homology models built on isoform sequence

IsoformOligo-stateLigandsQMEANTemplateRangeSeq id (%)
Isoform 2monomerK;-0.424ae4.1.A336-438
79.61
Assess
Isoform 3homo-2-merNHE;K;1.824ae4.1.A425-536
97.37
Assess
Isoform 3monomer-3.933ihp.1.A429-535
16.04
Assess
Isoform 3homo-4-mer-4.341c7y.1.9420-534
10.71
Assess
Isoform 3monomer-2.205x0w.3.A426-533
19.81
Assess
Isoform 3monomer-3.561ixr.1.B420-535
13.16
Assess
Isoform 3monomer-2.891lva.1.A423-529
13.68
Assess
Isoform 3monomer-4.256zqe.1.2424-536
14.95
Assess
Isoform 4homo-2-merNHE;K;1.824ae4.1.A453-564
97.37
Assess
Isoform 4monomer-2.963ihp.2.A456-563
16.04
Assess
Isoform 4homo-4-mer-4.341c7y.1.9448-562
10.71
Assess
Isoform 4monomer-2.205x0w.3.A454-561
19.81
Assess
Isoform 4monomer-3.631ixr.1.B449-563
13.27
Assess
Isoform 4monomer-2.851lva.1.A451-556
13.83
Assess