Q9UBB5 (MBD2_HUMAN) Homo sapiens (Human)
Methyl-CpG-binding domain protein 2 UniProtKBInterProSTRINGInteractive Modelling
411 aa; Sequence (Fasta) ; (Isoform 3);
2 identical sequences: Pongo abelii: H2NWD6; Pan troglodytes: A0A2J8NE08
Available Structures
14 Experimental Structures
| Description | PDB ID | Oligo-state | Range | Seq id (%) | Ligands | |
|---|---|---|---|---|---|---|
| Structure of the MTA1/HDAC1/MBD2 NURD deacetylase complex |
Heteromer Q13330; Q13547; | 100 | 2×IHP; 2×ZN; 4×K; | |||
| Structure of the core MTA1/HDAC1/MBD2 NURD deacetylase complex |
Heteromer Q13330; Q13547; | 100 | 2×IHP; 2×ZN; 4×K; | |||
| Structure of the extended MTA1/HDAC1/MBD2/RBBP4 NURD deacetylase complex |
Heteromer Q09028; Q13330; Q13547; | 100 | 2×IHP; 2×ZN; 4×K; | |||
| Solution structure of the coiled-coil complex between MBD2 and p66alpha |
Heteromer Q86YP4; | 100 | ||||
| MBD2 in complex with methylated DNA | homo-2-mer | 100 | 29×UNX; | |||
| MBD2 in complex with double-stranded DNA | homo-2-mer | 100 | 20×UNX; | |||
| MBD2 in complex with a deoxy-oligonucleotide | homo-2-mer | 100 | 24×UNX; | |||
| MBD2 in complex with a partially methylated DNA | homo-2-mer | 100 | 1×SO4; 24×UNX; 1×GOL; | |||
| Crystal structure of MBD2 with DNA | monomer | 98.63 | 17×UNX; | |||
| Crystal structure of MBD2 with DNA | monomer | 98.63 | 2×UNX; | |||
| MBD2 in complex with methylated DNA | monomer | 100 | 2×UNX; | |||
| Crystal structure of MBD2 complex with methylated CpG island | monomer | 100 | 1×CA; 7×UNX; | |||
| MBD2 in complex with methylated DNA | monomer | 100 | ||||
| Crystal structure of MBD2 with DNA | monomer | 98.53 | ||||
1 SWISS-MODEL model
| Template | Oligo-state | QMEAN | Range | Ligands | Trg-Tpl Seq id (%) | |
|---|---|---|---|---|---|---|
| 2mb7.1.A | monomer | 0.64 | 72.86 | |||
1 SWISS-MODEL model built on isoform sequence
| Isoform | Template | Oligo-state | QMEAN | Range | Ligands | Trg-Tpl Seq id (%) | |
|---|---|---|---|---|---|---|---|
| Isoform 3 | 2mb7.1.A | monomer | 0.64 | 72.86 | |||