Q9UGL1 (KDM5B_HUMAN) Homo sapiens (Human)

Lysine-specific demethylase 5B UniProtKBInterProSTRINGInteractive Modelling

1544 aa; Sequence (Fasta) ; (Isoform 2)

Available Structures

56 Experimental Structures

DescriptionPDB IDOligo-stateRangeSeq id (%)Ligands
Crystal structure of human KDM5B in complex with compound 34gmonomer26-755
100.0ZN;MN;DMS;PO4;FQN;EDO;
Crystal structure of human KDM5B in complex with compound 16amonomer26-755
100.0ZN;MN;FQ5;DMS;EDO;
Crystal structure of the catalytic domain of human JARID1B in complex with malatemonomer26-754
100.0ZN;LMR;MN;EPE;EDO;CL;PO4;
Crystal structure of KDM5B in complex with KDOPZ29amonomer26-754
100ZN;MN;B6T;DMS;EDO;
Crystal structure of the catalytic domain of human JARID1B in complex with MC3962monomer26-754
100.0ZN;UUN;MN;CL; 17×EDO;DMS;PO4;
Crystal structure of the catalytic domain of human PLU1 (JARID1B).monomer26-754
100.0ZN;MN;EPE; 11×EDO;
Crystal structure of the catalytic domain of human JARID1B in complex with MC3960monomer26-754
100.0ZN;H0X;MN;CL; 13×EDO;DMS;PO4;
Crystal structure of KDM5B in complex with KDOPZ000049a.monomer26-754
100ZN;MN;EDO;DMS;B7K;
Crystal structure of the catalytic domain of human JARID1B in complex with 3D fragment 3-Amino-4-me…monomer26-754
100ZN;MN;PO4; 13×EDO;DMS;BY4;CL;
Crystal structure of KDM5B in complex with KDOPZ48a.monomer26-754
100ZN;MN;DMS;B7Q;EDO;
Crystal structure of KDM5B in complex with S49365a.monomer26-754
100.0B7Z;ZN;MN;EDO;
Crystal structure of human JARID1B in complex with 2-oxoglutarate.monomer26-754
100.0ZN;MN;EPE;CL;AKG;EDO;
Crystal structure of KDM5B in complex with KDOPZ000034a.monomer26-754
100ZN;MN;EDO;DMS;B6W;
Crystal structure of human KDM5B in complex with compound 34amonomer26-754
100.0ZN;MN;EDO;PO4;FO2;DMS;
Crystal structure of KDM5B in complex with 5-(1H-tetrazol-5-yl)quinolin-8-olmonomer26-754
100ZN;MN;PO4;EDO;JX8;NA;
Crystal structure of human KDM5B in complex with compound 34fmonomer26-754
100.0ZN;MN;DMS;EDO;PO4;FQK;
Crystal structure of human JARID1B in complex with S40563amonomer26-754
100ZN;MN;EDO;DMS;5UJ;
Crystal structure of human JARID1B in complex with CCT363901monomer26-754
100.0ZN;MN;QAY;EDO;DMS;
Crystal structure of the catalytic domain of human JARID1B in complex with 3D fragment 2-(2-oxo-2,3…monomer26-753
100ZN;NYK;MN;PO4; 12×EDO;DMS;NA;
Crystal structure of the catalytic domain of human JARID1B in complex with MC1648monomer26-753
100ZN;MN;77J; 16×EDO;DMS;
Crystal structure of the catalytic domain of human JARID1B in complex with oxaloacetatemonomer26-753
100.0ZN;MN;EPE; 17×EDO;OAA;CL;PO4;
Crystal structure of the catalytic domain of human JARID1B in complex with 3D fragment (5-fluoro-2-…monomer26-753
100ZN;MN;WQS; 18×EDO;DMS;PO4;CL;
Crystal structure of the catalytic domain of human JARID1B in complex with D-2-hydroxyglutaratemonomer26-753
100.0ZN;MN;EPE; 14×EDO;2HG;CL;
Crystal structure of human PLU-1 (JARID1B) in complex with KDM5-C49 (2-(((2-((2-(dimethylamino)ethy…monomer26-753
100.0ZN;EPE;MMK;NI;EDO;MN;
Crystal structure of the catalytic domain of human JARID1B in complex with MC3095monomer26-753
100ZN;MN; 18×EDO;DMS;FIG;PO4;CL;
Crystal structure of the catalytic domain of human JARID1B in complex with MC3948monomer26-753
100.0ZN;CL;MN;EPE;EDO;DMS;7IA;PO4;
Crystal structure of human PLU-1 (JARID1B) in complex with KDOAM25amonomer26-753
100.0ZN;MN;LQT;DMS;PO4;EPE;EDO;
Crystal structure of human PLU-1 (JARID1B) in complex with Pyridine-2, 6-dicarboxylic Acid (PDCA)monomer26-753
100.0ZN;NA;PD2;MN;PO4;EPE;EDO;
Crystal structure of the catalytic domain of human JARID1B in complex with pyruvatemonomer26-753
100MN;ZN;EPE;EDO;PYR;
Crystal structure of the catalytic domain of human JARID1B in complex with Maybridge fragment 4,5-d…monomer26-753
100.0ZN;DMS;MN;EPE; 10×EDO;D8S;CL;PO4;
Crystal structure of the catalytic domain of human JARID1B in complex with 3D fragment N,3-dimethyl…monomer26-753
100.0ZN;CL;MN;EDO;NRW;PO4;DMS;
Crystal structure of the catalytic domain of human JARID1B in complex with L-2-hydroxyglutaratemonomer26-753
100.0ZN;MN;EPE; 13×EDO;S2G;CL;PO4;
Crystal structure of the catalytic domain of human JARID1B in complex with Maybridge fragment thien…monomer26-753
100.0ZN;DMS;MN;EPE;EDO;CL;NUK;PO4;
Crystal structure of the catalytic domain of human JARID1B in complex with 3D fragment (3R)-1-[(3-p…monomer26-753
100.0ZN;P6B;MN;CL; 10×EDO;DMS;PO4;
Crystal structure of the catalytic domain of human JARID1B in complex with Maybridge fragment 4,5-d…monomer26-753
100ZN;DMS;MN;EPE;EDO;CL;0TI;
Crystal structure of the catalytic domain of human JARID1B in complex with 3D fragment 2-piperidin-…monomer26-753
100.0ZN;CL;MN;80Q; 10×EDO;DMS;
Crystal structure of the catalytic domain of PLU1 in complex with N-oxalylglycine.monomer26-753
100.0ZN;OGA;MN;PO4;EPE;EDO;
Crystal structure of the catalytic domain of human JARID1B in complex with succinatemonomer26-753
100.0ZN;MN;EDO;FUM;
Crystal structure of the catalytic domain of human JARID1B in complex with Maybridge fragment 4-Pyr…monomer26-753
98.67ZN;DMS;MN;EPE;EDO;CL;YS6;PO4;
Crystal structure of the catalytic domain of human JARID1B in complex with Maybridge fragment 3-pyr…monomer26-753
100.0ZN;CL;MN;N6Y; 18×EDO;DMS;PO4;
Crystal structure of human JARID1B in complex with GSKJ1monomer26-753
100.0ZN;K0I;MN;PO4;EPE;EDO;
Crystal structure of the catalytic domain of human JARID1B in complex with Maybridge fragment ethyl…monomer26-753
100.0ZN;DMS;MN;PO4;EDO;CL;WGT;
Crystal structure of human JARID1B in complex with GSK467monomer26-753
100.0ZN;GZA;MN;NA;PO4;EPE;EDO;
Crystal structure of the catalytic domain of human JARID1B in complex with Maybridge fragment N0585…monomer26-753
100.0ZN;DMS;MN;EPE; 10×EDO;MN1;CL;PO4;
Crystal structure of human JARID1B construct c2 in complex with N- Oxalylglycine.monomer26-753
100ZN;DMS;MN;EPE;EDO;CL;OGA;
Crystal structure of the catalytic domain of human JARID1B in complex with Maybridge fragment 2,4-d…monomer26-753
100.0ZN;DMS;MN;PO4; 12×EDO;W77;
Crystal structure of human JARID1B in complex with S40650amonomer26-753
100.0ZN;MN;EDO;DMS;79H;
Crystal structure of the catalytic domain of human JARID1B in complex with 2,5-dichloro-N-(pyridin-…monomer26-753
100.0ZN;DMS;MN;EPE;EDO;CL;DJ6;PO4;
Crystal structure of the catalytic domain of human JARID1B in complex with fumaratemonomer26-753
100.0ZN;MN;EPE;EDO;FUM;
Crystal structure of the catalytic domain of human JARID1B in complex with 3D fragment 5-(2-fluorop…monomer26-753
100.0ZN;DMS;MN; 10×EDO;P60;CL;PO4;
Crystal structure of the catalytic domain of human JARID1B in complex with Maybridge fragment 3,6-D…monomer26-753
100.0ZN;DMS;MN;7SI;EDO;CL;PO4;
Crystal structure of the catalytic domain of human JARID1B in complex with 3D fragment 3-methyl-N-p…monomer26-753
100.0ZN;DMS;MN; 10×EDO;UOI;CL;PO4;
Crystal structure of KDM5B in complex with S49195a.monomer347-754
94.8ZN;MN;NI;90V;DMS;EDO;
Solution NMR structure of PHD type Zinc finger domain of Lysine-specific demethylase 5B (PLU-1/JARI…monomer1487-1544
100ZN;
NMR Structure of KDM5B PHD1 fingermonomer306-360
100ZN;
NMR Structure of KDM5B PHD1 finger in complex with H3K4me0(1-10aa)monomer306-360
100ZN;

4 SWISS-MODEL models

TemplateOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
2ma5.1.Amonomer0.651487-1544
ZN;100.00
5k4l.1.Amonomer0.6131-801
NI;ZN;6QN;64.69
2mny.1.Amonomer0.57306-360
ZN;100.00
6nz1.1.Amonomer0.51836-916
12.35

2 SWISS-MODEL models built on isoform sequence

IsoformTemplateOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
Isoform 22ma5.1.Amonomer0.651523-1580
ZN;100.00
Isoform 25k4l.1.Amonomer0.6231-837
NI;ZN;6QN;64.95