Q9UQD0 | SWISS-MODEL Repository

Q9UQD0 (SCN8A_HUMAN) Homo sapiens (Human)

Sodium channel protein type 8 subunit alpha UniProtKB InterPro STRING Interactive Modelling

1980 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3; Isoform 4; Isoform 5); 2 identical sequences: Pan troglodytes: A0A2J8KDL9; Pan paniscus: A0A2R9CPA9

It is possible new templates exist for this target since these models were created.

Available Structures

3 Experimental Structures

	Description	PDB ID	Oligo-state	Range	Seq id (%)	Ligands
	Cryo-EM structure of human voltage-gated sodium channel Nav1.6	8fhd PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer Q07699;	11-1777	100.0	1×NAG; 1×NAG; 7×NAG; 4×Y01; 1×CLR; 5×LPE; 3×PCW; 2×P5S; 1×9Z9; 1×P3X;
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	Cryo-EM structure of human NaV1.6/beta1/beta2-4,9-anhydro-tetrodotoxin	8gz2 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O60939; Q07699;	106-1772	100.0	5×NAG; 2×NAG; 1×WMK;
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	Cryo-EM structure of human NaV1.6/beta1/beta2,apo state	8gz1 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O60939; Q07699;	128-1772	100.0	5×NAG; 2×NAG; 2×NA;
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2 SWISS-MODEL models

	Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
	7w9k.1.A	monomer	0.63	10-1897	2×Y01; 1×9Z9; 6×LPE; 1×1PW; 2×PCW;	72.34
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	8vyk.1.A	monomer	0.53	13-1876	2×Y01;	65.51
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	Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

	Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

7 SWISS-MODEL models built on isoform sequence

	Isoform	Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
	Isoform 2	7w9k.1.A	monomer	0.63	10-1897	2×Y01; 1×9Z9; 6×LPE; 1×1PW; 2×PCW;	72.29
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	Isoform 2	8vyk.1.A	monomer	0.53	13-1876	2×Y01;	65.51
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	Isoform 3	7w9k.1.A	monomer	0.63	10-1908	3×Y01; 1×9Z9; 6×LPE; 1×1PW; 2×PCW;	72.49
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	Isoform 3	8vyk.1.A	monomer	0.52	13-1887	3×Y01;	65.20
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	Isoform 4	7w9k.1.A	monomer	0.54	10-1278	2×Y01; 1×LPE; 1×PCW;	69.28
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	Isoform 5	7w9k.1.A	monomer	0.62	10-1856	3×Y01; 1×9Z9; 5×LPE; 1×1PW; 2×PCW;	72.01
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	Isoform 5	8vyj.1.A	monomer	0.52	13-1835	1×6OU; 4×Y01;	64.97
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Alignments