Q9Y210 (TRPC6_HUMAN) Homo sapiens (Human)

Short transient receptor potential channel 6 UniProtKBInterProSTRINGInteractive Modelling

931 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3; )

Sequence Features

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 15P -> S (in dbSNP:rs3802829) VAR_079784 dbSNP
 88F -> FAYMF (in FSGS2; unknown pathological significance) VAR_079785
 109G -> S (in FSGS2; increases calcium ion transport) VAR_079786
 112P -> Q (in FSGS2; increases calcium ion transport; dbSNP:rs121434390) VAR_026730 dbSNP
 125N -> S (in FSGS2; unknown pathological significance; decreases calcium ion transport; dbSNP:rs146776939) VAR_067247 dbSNP
 143N -> S (in FSGS2; increases cation channel activity; does not change the outward peak current; increases significantly the inward peak current amplitude; increases calcium ion transport; dbSNP:rs121434391) VAR_026731 dbSNP
 157N -> T (in dbSNP:rs35857503) VAR_038419 dbSNP
 175R -> Q (in FSGS2; increases cation channel activity; does not change plasma membrane expression; increases calcium ion transport; dbSNP:rs1451194842) VAR_079787 dbSNP
 218H -> L (in FSGS2; increases calcium ion transport; dbSNP:rs779430565) VAR_067248 dbSNP
 270S -> T (in FSGS2; dbSNP:rs121434392) VAR_026732 dbSNP
 360R -> H (in FSGS2; unknown pathological significance; dbSNP:rs777715086) VAR_079788 dbSNP
 395L -> A (in FSGS2; unknown pathological significance; requires 2 nucleotide substitutions; decreases calcium ion transport) VAR_079789
 404A -> V (increases calcium ion transport; dbSNP:rs36111323) VAR_061861 dbSNP
 757G -> D (in FSGS2; decreases calcium ion transport; does not change localization at cell membrane; does not affect homodimer formation) VAR_079790
 780L -> P (in FSGS2; unknown pathological significance; decreases calcium ion transport; dbSNP:rs771594597) VAR_079791 dbSNP
 895R -> C (in FSGS2; increases cation channel activity; does not change plasma membrane expression; significantly reduces the ratio of cell-surface to total expression; increases calcium ion transport; dbSNP:rs121434394) VAR_026733 dbSNP
 895R -> L (in FSGS2; decreases calcium ion transport) VAR_067249
 897E -> K (in FSGS2; increases calcium ion transport; dbSNP:rs121434395) VAR_026734 dbSNP
 897Missing (in FSGS2) VAR_079793
 439-459Helical
 488-508Helical
 522-542Helical
 593-613Helical
 637-657Helical
 707-727Helical
 874-931Missing (in FSGS2) VAR_079792
 104-183Ankyrin repeat-containing domain
IPR020683PF12796
 253-315Transient receptor ion channel domain
IPR013555PF08344
 450-738Ion transport domain
IPR005821PF00520

Sequence Alignments

Experimental structures

DescriptionOligo-stateLigandsStructureRange
Cryo-EM structure of human TRPC6 at 3.8A resolutionhomo-4-mer 5yx985-921
Assess
Cryo-EM structure of human TRPC6 in complex with antagonist AM-1473homo-4-mer R0G;S9Y;SBJ;Y01;6uza85-920
Assess
Cryo-EM structure of human TRPC6 in complex with agonist AM-0883homo-4-mer SBM;Y01;R0D;6uz885-920
Assess
Cryo-EM structure of the cytoplasmic domain of human TRPC6homo-4-mer ZN;7a6u86-920
Assess

Homology models built on isoform sequence

IsoformOligo-stateLigandsQMEANTemplateRangeSeq id (%)
Isoform 2homo-4-merSBM;Y01;R0D;-3.376uz8.1.A93-804
99.72
Assess
Isoform 2monomer-4.817b1g.1.A94-786
41.75
Assess
Isoform 2monomer-4.455le3.1.A98-255
27.56
Assess
Isoform 3homo-4-merSBM;Y01;R0D;-2.886uz8.1.A85-865
99.24
Assess