Q9Y5G1 (PCDGF_HUMAN) Homo sapiens (Human)
Protocadherin gamma-B3 UniProtKBInterProSTRINGInteractive Modelling
929 aa; Sequence (Fasta) ; (Isoform 2; )
Sequence Features
| 20 | F -> Y (in dbSNP:rs6860590) VAR_048569 dbSNP | ||
| 28 | A -> V (in dbSNP:rs6860609) VAR_061073 dbSNP | ||
| 389 | N -> K (in dbSNP:rs2240697) VAR_048570 dbSNP | ||
| 692-712 | Helical | ||
| 33-111 | Cadherin, N-terminal IPR013164PF08266 | ||
| 140-232 | Cadherin-like IPR002126PF00028 | ||
| 247-337 | Cadherin-like IPR002126PF00028 | ||
| 355-443 | Cadherin-like IPR002126PF00028 | ||
| 457-552 | Cadherin-like IPR002126PF00028 | ||
| 581-661 | Cadherin-like IPR002126PF00028 | ||
| 687-769 | Cadherin, cytoplasmic C-terminal domain IPR032455PF16492 | ||
| 808-926 | Cadherin, C-terminal catenin-binding domain IPR031904PF15974 |
Sequence Alignments
Experimental structures
| Description | Oligo-state | Ligands | Structure | Range |
|---|---|---|---|---|
| Structure of human clustered protocadherin gamma B3 EC1-4 | homo-2-mer | 18×CA; 4×CL; 2×NA; 2×EPE; 2×EDO; | 5k8r | |
| Assess | ||||
| PcdhgB3 EC1-4 in 50 mM HEPES | homo-2-mer | 18×CA; | 6meq | |
| Assess | ||||
| PcdhgB3 EC1-4 in 50 mM HEPES | homo-2-mer | 18×CA; | 6mer | |
| Assess | ||||
Homology models
| Oligo-state | QMEAN | Template | Range | Seq id (%) | Ligands |
|---|---|---|---|---|---|
| homo-2-mer | -1.97 | 6e6b.1.A | 66.88 | 26×CA; | |
| Assess | |||||
Homology models built on isoform sequence
| Isoform | Oligo-state | Ligands | QMEAN | Template | Range | Seq id (%) |
|---|---|---|---|---|---|---|
| Isoform 2 | homo-2-mer | 26×CA; | -1.97 | 6e6b.1.A | 66.88 | |
| Assess | ||||||