Q9Y5I3 (PCDA1_HUMAN) Homo sapiens (Human)

Protocadherin alpha-1 UniProtKBInterProSTRINGInteractive Modelling

950 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3; )

Sequence Features

Add
 360R -> G (in dbSNP:rs34575154) VAR_048521 dbSNP
 449N -> H (in dbSNP:rs3733712) VAR_021872 dbSNP
 732Y -> C (in dbSNP:rs2240696) VAR_021873 dbSNP
 759C -> F (in dbSNP:rs2240695) VAR_048522 dbSNP
 698-718Helical
 30-111Cadherin, N-terminal
IPR013164PF08266
 142-233Cadherin-like
IPR002126PF00028
 247-341Cadherin-like
IPR002126PF00028
 359-445Cadherin-like
IPR002126PF00028
 460-556Cadherin-like
IPR002126PF00028
 588-669Cadherin-like
IPR002126PF00028
 800-933Cadherin, C-terminal catenin-binding domain
IPR031904PF15974

Sequence Alignments

Homology models

Oligo-stateQMEANTemplateRangeSeq id (%)Ligands
homo-2-mer -3.06 6e6b.1.A30-668
42.8619×CA;
Assess
homo-2-mer -4.01 5t9t.1.A137-668
27.9414×CA;
Assess

Homology models built on isoform sequence

IsoformOligo-stateLigandsQMEANTemplateRangeSeq id (%)
Isoform 2homo-2-merNAG; 15×CA;-3.645dzv.1.A30-540
73.97
Assess
Isoform 2homo-2-mer14×CA;-3.836e6b.1.A30-587
40.89
Assess
Isoform 3homo-2-mer20×CA;-3.306e6b.1.A30-668
42.86
Assess
Isoform 3homo-2-mer14×CA;-4.155t9t.1.A137-668
27.94
Assess