Q9Y6K9 (NEMO_HUMAN) Homo sapiens (Human)

NF-kappa-B essential modulator UniProtKBInterProSTRINGInteractive Modelling

419 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3; )

Sequence Features

Add
 54Interchain
 347Interchain
 57E -> K (in IP; shows the same luciferase activity as the control; dbSNP:rs148695964) VAR_026491 dbSNP
 90Missing (in IP; only 46.3% of the activation obtained with the wild-type protein) VAR_026492
 113D -> N (in dbSNP:rs179363896) VAR_026493 dbSNP
 123R -> W (in IP; shows the same luciferase activity as the control; dbSNP:rs179363895) VAR_026494 dbSNP
 153L -> R (in EDAID1; dbSNP:rs137853328) VAR_026495 dbSNP
 170L -> P (in IP) VAR_072603
 173R -> G (in IMD33; dbSNP:rs179363866) VAR_031958 dbSNP
 173R -> Q (in IP; dbSNP:rs1057520292) VAR_072604 dbSNP
 175R -> P (in EDAID1; dbSNP:rs179363868) VAR_011320 dbSNP
 183Q -> H (in IP; dbSNP:rs1198984417) VAR_072605 dbSNP
 227L -> P (in EDAID1; dbSNP:rs179363869) VAR_011321 dbSNP
 288A -> G (in EDAID1; dbSNP:rs137853330) VAR_011322 dbSNP
 311D -> N (in EDAID1; abolishes binding to polyubiquitin ('K63'-linked and linear) and greatly impairs tandem ubiquitin binding; dbSNP:rs179363867) VAR_011323 dbSNP
 314A -> P (in IP) VAR_072606
 315E -> A (in IMD33; greatly impairs tandem ubiquitin binding. Impairs oligomerization, impairs binding of 'Lys- 63'-linked ubiuitin and linear tetra-ubiquitin, impairs TNF-induced NF-kappa-B activation; dbSNP:rs137853331) VAR_031959 dbSNP
 319R -> Q (in IMD33; impairs tandem ubiquitin binding; dbSNP:rs137853332) VAR_031960 dbSNP
 322L -> P (in IP) VAR_072607
 323A -> P (in IP; diminishes interaction with TRAF6 and polyubiquitination, greatly impairs tandem ubiquitin binding. Impairs oligomerization, greatly impairs binding of 'Lys-63'-linked ubiuitin and linear tetra-ubiquitin, impairs TNF-induced NF-kappa-B activation; dbSNP:rs179363865) VAR_042666 dbSNP
 406D -> V (in EDAID1; dbSNP:rs137853327) VAR_011324 dbSNP
 407M -> V (in IP; impairs binding to ubiquitin; dbSNP:rs137853322) VAR_009182 dbSNP
 413H -> Y (in IP) VAR_072608
 417C -> F (in EDAID1; dbSNP:rs137853326) VAR_011325 dbSNP
 417C -> R (in EDAID1; loss of sumoylation; dbSNP:rs137853325) VAR_011326 dbSNP
 417C -> Y (in IMD33; dbSNP:rs137853326) VAR_026496 dbSNP
 389-419CCHC NOA-type
 45-111NF-kappa-B essential modulator NEMO, N-terminal
IPR021063PF11577
 257-344NF-kappa-B essential modulator NEMO, CC2-LZ domain
IPR032419PF16516

Sequence Alignments

Experimental structures

DescriptionOligo-stateLigandsStructureRange
NEMO/IKKb association domain structure Heteromer
O14920;
3brv49-110
Assess
NEMO/IKK association domain structure Heteromer
O14920; O15111;
3brt49-110
Assess
Crystal Structure of a vFLIP-IKKgamma complex: Insights into viral activation of the IKK signalosome Heteromer
Q76RF1;
3cl3193-253
Assess
Crystal structure of a vFLIP-IKKgamma stapled peptide dimer Heteromer
F5HEZ4; P19909;
5lde230-249
Assess
Structure of NEMO(51-112) with N- and C-terminal coiled-coil adaptors.homo-2-mer 6mi338-129
Assess
Structure of the I65M mutant of NEMO(51-112) with N- and C-terminal coiled-coil adaptors.homo-2-mer 6mi438-129
Assess
NEMO CC2-LZ DOMAINhomo-2-mer 4bwn259-344
Assess
Crystal structure of Human NEMO CC2_LZ domainhomo-2-mer 3fx0263-333
Assess
TBK1 recruitment to cytosol-invading Salmonella induces anti- bacterial autophagymonomer ZN;5aay392-419
Assess
Solution Structure of human NEMO zinc fingermonomer ZN;2jvx394-419
Assess
Solution Structure of the EDA-ID-related C417F mutant of human NEMO zinc fingermonomer ZN;2jvy394-419
Assess

Homology models

Oligo-stateQMEANTemplateRangeSeq id (%)Ligands
homo-2-mer -1.86 3uf1.1.A87-206
16.98
Assess
homo-2-mer -2.40 6mi3.1.A49-153
72.53
Assess

Homology models built on isoform sequence

IsoformOligo-stateLigandsQMEANTemplateRangeSeq id (%)
Isoform 2homo-2-mer-1.863uf1.1.A155-274
16.98
Assess
Isoform 2monomer0.453cl3.1.C261-319
100.00
Assess
Isoform 2homo-2-mer-1.906mi3.1.A115-221
72.04
Assess
Isoform 2homo-2-mer3.104bwn.1.A327-412
98.85
Assess
Isoform 3monomer-1.814rh7.1.A135-246
11.88
Assess
Isoform 3homo-3-mer-1.864lin.2.A39-162
12.07
Assess
Isoform 3homo-2-mer-1.676snz.1.A90-243
18.60
Assess
Isoform 3monomer-0.556f1t.1.U53-249
17.24
Assess
Isoform 3homo-2-mer3.136mi3.1.A49-127
79.75
Assess
Isoform 3homo-4-mer-3.582d3e.1.A143-249
23.53
Assess
Isoform 3homo-2-mer-2.083o0z.1.A71-192
21.37
Assess
Isoform 3monomer-2.105cws.1.E42-155
12.84
Assess