Q9Y6K9 (NEMO_HUMAN) Homo sapiens (Human)

NF-kappa-B essential modulator UniProtInterproStringInteractive Modelling

419 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3; )

Sequence Features

 54Interchain.
 347Interchain.
 57E -> K (in IP; shows the same luciferase activity as the control; dbSNP:rs148695964). VAR_026491 dbSNP
 90Missing (in IP; only 46.3% of the activation obtained with the wild-type protein). VAR_026492
 113D -> N (in dbSNP:rs179363896). VAR_026493 dbSNP
 123R -> W (in IP; shows the same luciferase activity as the control; dbSNP:rs179363895). VAR_026494 dbSNP
 153L -> R (in EDAID; dbSNP:rs137853328). VAR_026495 dbSNP
 170L -> P (in IP). VAR_072603
 173R -> G (in IPD2; dbSNP:rs179363866). VAR_031958 dbSNP
 173R -> Q (in IP). VAR_072604
 175R -> P (in EDAID; dbSNP:rs179363868). VAR_011320 dbSNP
 183Q -> H (in IP). VAR_072605
 227L -> P (in EDAID; dbSNP:rs179363869). VAR_011321 dbSNP
 288A -> G (in EDAID; dbSNP:rs137853330). VAR_011322 dbSNP
 311D -> N (in EDAID; abolishes binding to polyubiquitin ('K63'-linked and linear) and greatly impairs tandem ubiquitin binding; dbSNP:rs179363867). VAR_011323 dbSNP
 314A -> P (in IP). VAR_072606
 315E -> A (in IMD33; greatly impairs tandem ubiquitin binding. Impairs oligomerization, impairs binding of 'Lys- 63'-linked ubiuitin and linear tetra- ubiquitin, impairs TNF-induced NF-kappa-B activation; dbSNP:rs137853331). VAR_031959 dbSNP
 319R -> Q (in IMD33; impairs tandem ubiquitin binding; dbSNP:rs137853332). VAR_031960 dbSNP
 322L -> P (in IP). VAR_072607
 323A -> P (in IP; diminishes interaction with TRAF6 and polyubiquitination, greatly impairs tandem ubiquitin binding. Impairs oligomerization, greatly impairs binding of 'Lys-63'-linked ubiuitin and linear tetra-ubiquitin, impairs TNF- induced NF-kappa-B activation; dbSNP:rs179363865). VAR_042666 dbSNP
 406D -> V (in EDAID; dbSNP:rs137853327). VAR_011324 dbSNP
 407M -> V (in IP; impairs binding to ubiquitin; dbSNP:rs137853322). VAR_009182 dbSNP
 413H -> Y (in IP). VAR_072608
 417C -> F (in EDAID; dbSNP:rs137853326). VAR_011325 dbSNP
 417C -> R (in EDAID; loss of sumoylation; dbSNP:rs137853325). VAR_011326 dbSNP
 417C -> Y (in NEMOID; dbSNP:rs137853326). VAR_026496 dbSNP
 389-419CCHC NOA-type.
 45-111NF-kappa-B essential modulator NEMO, N-t erminal
IPR021063PF11577
 256-344NF-kappa-B essential modulator NEMO, CC2 -LZ domain
IPR032419PF16516

Sequence Alignments

Experimental structures

DescriptionOligo-stateLigandsStructureRangeDownload
'Crystal Structure of a vFLIP-IKKgamma complex: Insights into viral activation of the IKK signalo... Heteromer
Q9Y6K9; Q76RF1;
3cl3150-272
NEMO/IKKb association domain structure Heteromer
Q9Y6K9; O14920;
3brv44-111
NEMO/IKK association domain structure Heteromer
Q9Y6K9; O15111; O14920; O15111; O14920;
3brt44-111
Crystal structure of Human NEMO CC2_LZ domainhomo-2-mer 3fx0246-337
NEMO CC2-LZ DOMAINhomo-2-mer 4bwn258-344
TBK1 recruitment to cytosol-invading Salmonella induces anti- bacterial autophagymonomer ZN;5aay392-419
Solution Structure of the EDA-ID-related C417F mutant of human NEMO zinc fingermonomer ZN;2jvy394-419
Solution Structure of human NEMO zinc fingermonomer ZN;2jvx394-419

Homology models

Oligo-stateLigandsQMEANTemplateRangeSeq id (%)ReportDownload
monomer 1.133jax.1.B110-214
13.33
monomer 0.162v71.1.B77-199
24.03
monomer -0.684rh7.1.A95-202
11.43
monomer -3.584uxv.1.A64-341
17.41
monomer -3.743wuq.1.A40-175
11.76
monomer -4.954uxv.1.A94-345
15.35

Homology models built on isoform sequence

Isoform #Oligo-stateLigandsQMEANTemplateRangeSeq id (%)ReportDownload
3monomer2.123brv.1.D49-110
100.00
2monomer1.783brt.1.D117-178
98.53
2monomer0.882zvo.1.D325-412
88.76
2monomer0.182v71.1.B145-267
24.81
2monomer0.173o0z.2.B136-245
18.45
3monomer-0.123o0z.2.B67-192
20.83
3monomer-0.402d3e.1.A141-248
25.24
2monomer-0.544bne.1.B119-267
16.11
2monomer-0.864xa6.1.A185-287
13.13
3monomer-0.914tko.1.A106-246
16.67
3monomer-1.262v4h.1.A144-245
50.57
3monomer-1.575lm2.2.A55-236
11.67
2monomer-2.163uf1.1.B160-274
17.82
3monomer-2.362ocy.1.B95-236
15.25
3monomer-2.391s94.2.A89-193
11.02
3monomer-2.705kuc.1.A59-197
15.11
3monomer-2.883ghg.1.A53-168
17.14
3monomer-3.034rh7.1.A43-215
10.32
2monomer-3.714ll8.1.C210-338
15.53
3monomer-3.773vkh.1.A47-216
10.13
2monomer-3.805ghe.1.A193-380
8.81
2monomer-4.844uxv.1.A163-414
14.91