SMTL ID : 8ytj.4 (3 other biounits)

Cryo-EM structure of enterovirus A71 mature virion

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-mer

Ligands

1 x SPH: SPHINGOSINE(Non-covalent)

SPH.1: 14 residues within 4Å: Chain A: I.111, D.112, I.113, F.135, F.137, Y.153, F.155, V.179, V.192, M.195, W.203, N.228, M.230, F.233 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:I.111, A:F.135, A:F.135, A:F.137, A:F.155, A:F.155, A:V.179, A:V.192, A:M.230 Hydrogen bonds: A:I.111, A:I.113

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhu, R. et al., Broadly therapeutic antibody provides cross-serotype protection against enteroviruses via Fc effector functions and by mimicking SCARB2. Nat Microbiol (2024)

Release Date

2024-09-04

Peptides

Capsid protein VP1: A
Capsid protein VP2: B
Capsid protein VP3: C
Capsid protein VP4: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Capsid protein VP1

Capsid protein VP2

Capsid protein VP3

Capsid protein VP4

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