SMTL ID : 1a5h.2 (1 other biounit)

CATALYTIC DOMAIN OF HUMAN TWO-CHAIN TISSUE PLASMINOGEN ACTIVATOR COMPLEX OF A BIS-BENZAMIDINE

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

monomer

Ligands

1 x THR- CYS- GLY- LEU- ARG- GLN- TYR: TISSUE PLASMINOGEN ACTIVATOR(Non-covalent)

THR-CYS-GLY-LEU-ARG-GLN-TYR.1: 14 residues within 4Å: Chain A: A.10, S.11, H.12, P.13, W.14, E.112, S.114, R.117, T.118, V.119, C.120, E.135, R.214, M.215 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:W.14 Hydrogen bonds: A:A.10, A:S.11, A:H.12, A:E.112, A:R.117, A:R.117, A:T.118, A:C.120, A:R.214, A:R.214, A:M.215 Water bridges: A:S.11 Salt bridges: A:E.135

1 x BBA: 2,7-BIS-(4-AMIDINOBENZYLIDENE)-CYCLOHEPTAN-1-ONE(Non-covalent)

BBA.2: 19 residues within 4Å: Chain A: D.91, T.92, Y.93, R.174, T.175, D.197, A.198, C.199, Q.200, S.203, I.221, W.223, G.224, G.226, C.227, G.228, G.234, V.235, Y.236 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:Y.93, A:A.198, A:Q.200, A:I.221, A:W.223, A:W.223, A:W.223, A:W.223 Hydrogen bonds: A:T.92, A:D.197, A:A.198, A:G.224, A:G.226 Water bridges: A:R.174, A:L.225, A:G.234 pi-Stacking: A:Y.93

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Renatus, M. et al., Structural mapping of the active site specificity determinants of human tissue-type plasminogen activator. Implications for the design of low molecular weight substrates and inhibitors. J.Biol.Chem. (1997)

Release Date

1999-04-20

Peptides

TISSUE PLASMINOGEN ACTIVATOR: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

TISSUE PLASMINOGEN ACTIVATOR

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