SMTL ID : 1a5i.1

CATALYTIC DOMAIN OF VAMPIRE BAT (DESMODUS ROTUNDUS) SALIVA PLASMINOGEN ACTIVATOR IN COMPLEX WITH EGR-CMK (GLU-GLY-ARG CHLOROMETHYL KETONE)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

monomer

Ligands

1 x 0GJ: L-alpha-glutamyl-N-{(1S)-4-{[amino(iminio)methyl]amino}-1-[(1S)-2-chloro-1-hydroxyethyl]butyl}glycinamide(Covalent)

0GJ.1: 15 residues within 4Å: Chain A: H.60, Y.106, K.187, D.210, A.211, C.212, Q.213, G.214, D.215, S.216, I.234, S.235, W.236, G.237, G.239 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:Y.106, A:K.187, A:A.211, A:Q.213, A:G.214, A:D.215, A:S.216, A:S.235, A:G.237, A:G.239, A:G.239 Water bridges: A:V.238 Salt bridges: A:D.210

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Renatus, M. et al., Catalytic domain structure of vampire bat plasminogen activator: a molecular paradigm for proteolysis without activation cleavage. Biochemistry (1997)

Release Date

1999-03-23

Peptides

PLASMINOGEN ACTIVATOR: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PLASMINOGEN ACTIVATOR