SMTL ID : 1a65.1

TYPE-2 CU-DEPLETED LACCASE FROM COPRINUS CINEREUS

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.23 Å

Oligo State

monomer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 4 residues within 4Å: Chain A: R.330, F.331, N.343, Y.375 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:F.331, A:Y.375 Hydrogen bonds: A:R.330 Water bridges: A:R.330, A:R.330

1 x PYE: TETRAHYDROPYRAN(Covalent)

PYE.2: 4 residues within 4Å: Chain A: P.55, E.496, S.499, Q.501 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:P.55

3 x CU: COPPER (II) ION(Non-covalent)

CU.3: 5 residues within 4Å: Chain A: H.396, C.452, I.454, H.457, L.462 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.396, A:C.452, A:H.457 CU.4: 5 residues within 4Å: Chain A: H.111, H.399, H.401, H.451 Ligands: O.6 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Ligand interactions Metal complexes: A:H.111, A:H.399, A:H.401, A:H.451, O.6 CU.5: 6 residues within 4Å: Chain A: H.64, H.66, W.107, H.109, H.453 Ligands: O.6 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.66, A:H.109, A:H.453

1 x O: OXYGEN ATOM(Non-covalent)

O.6: 9 residues within 4Å: Chain A: H.64, H.109, H.111, H.399, H.401, H.451, H.453 Ligands: CU.4, CU.5 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ducros, V. et al., Crystal structure of the type-2 Cu depleted laccase from Coprinus cinereus at 2.2 A resolution. Nat.Struct.Biol. (1998)

Release Date

1999-03-30

Peptides

LACCASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

LACCASE