SMTL ID : 1a8a.1

RAT ANNEXIN V COMPLEXED WITH GLYCEROPHOSPHOSERINE

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

10 x CA: CALCIUM ION(Non-covalent)

CA.1: 4 residues within 4Å: Chain A: M.26, G.28, G.30, E.70 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:M.26, A:G.28, A:G.30, A:E.70, H2O.4 CA.2: 3 residues within 4Å: Chain A: K.68, L.71, E.76 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:K.68, A:L.71, A:E.76, A:E.76, H2O.2 CA.3: 2 residues within 4Å: Chain A: T.31, E.33 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:T.31, A:E.33, H2O.3, H2O.4, H2O.4 CA.4: 6 residues within 4Å: Chain A: L.98, K.99, G.100, A.101, G.102, D.142 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:L.98, A:G.100, A:A.101, A:G.102, A:D.142 CA.5: 4 residues within 4Å: Chain A: V.140, G.141, T.143, Q.148 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:V.140, A:T.143, H2O.3, H2O.4 CA.6: 2 residues within 4Å: Chain A: T.103, E.105 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:T.103, A:E.105, A:E.105, H2O.4 CA.7: 5 residues within 4Å: Chain A: G.181, K.184, G.186, E.226 Ligands: GSE.11 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:G.181, A:K.184, A:G.186, A:E.226, H2O.1 CA.8: 4 residues within 4Å: Chain A: D.224, T.227, S.228, E.232 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.224, A:T.227, A:E.232, A:E.232 CA.9: 3 residues within 4Å: Chain A: T.187, E.189 Ligands: GSE.11 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:T.187, A:E.189, H2O.3, H2O.4, H2O.4 CA.10: 5 residues within 4Å: Chain A: M.257, G.259, A.260, G.261, D.301 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:M.257, A:G.259, A:A.260, A:G.261, A:D.301

1 x GSE: L-ALPHA-GLYCEROPHOSPHORYLSERINE(Non-covalent)

GSE.11: 9 residues within 4Å: Chain A: K.184, W.185, G.186, T.187, E.189, R.225, E.226 Ligands: CA.7, CA.9 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:G.186, A:T.187, A:T.187, A:T.187, A:T.187 Water bridges: A:K.184, A:E.189

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Swairjo, M.A. et al., Ca(2+)-bridging mechanism and phospholipid head group recognition in the membrane-binding protein annexin V. Nat.Struct.Biol. (1995)

Release Date

1998-06-17

Peptides

ANNEXIN V: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

ANNEXIN V

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