SMTL ID : 1add.1

A PRE-TRANSITION STATE MIMIC OF AN ENZYME: X-RAY STRUCTURE OF ADENOSINE DEAMINASE WITH BOUND 1-DEAZA-ADENOSINE AND ZINC-ACTIVATED WATER

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: H.12, H.14, H.211, D.292 Ligands: 1DA.2 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.12, A:H.14, A:H.211, A:D.292, H2O.3

1 x 1DA: 1-DEAZA-ADENOSINE(Non-covalent)

1DA.2: 17 residues within 4Å: Chain A: H.14, D.16, L.55, F.58, L.59, F.62, R.98, Y.99, S.100, L.103, M.152, A.180, G.181, E.214, D.292, D.293 Ligands: ZN.1 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.55 Hydrogen bonds: A:D.16, A:R.98, A:G.181, A:E.214 pi-Stacking: A:H.14 pi-Cation interactions: A:H.211

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wilson, D.K. et al., A pre-transition-state mimic of an enzyme: X-ray structure of adenosine deaminase with bound 1-deazaadenosine and zinc-activated water. Biochemistry (1993)

Release Date

1994-01-31

Peptides

ADENOSINE DEAMINASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

ADENOSINE DEAMINASE

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