SMTL ID : 1aer.1

DOMAIN III OF PSEUDOMONAS AERUGINOSA EXOTOXIN COMPLEXED WITH BETA-TAD

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-tetramer

Ligands

2 x TAD: BETA-METHYLENE-THIAZOLE-4-CARBOXYAMIDE-ADENINE DINUCLEOTIDE(Non-covalent)

TAD.1: 13 residues within 4Å: Chain A: H.42, G.43, T.44, F.45, A.48, S.51, I.52, G.56, V.57, R.58, Y.72, Y.83, E.155 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:H.42, A:G.43, A:G.43, A:T.44, A:S.51, A:S.51, A:R.58, A:Y.72, A:E.155 Water bridges: A:Y.83, A:E.148 pi-Stacking: A:Y.83 TAD.4: 13 residues within 4Å: Chain C: H.42, G.43, T.44, F.45, A.48, S.51, I.52, G.56, V.57, R.58, Y.72, Y.83, E.155 10 PLIP interactions: 10 interactions with chain C Hydrogen bonds: C:H.42, C:G.43, C:G.43, C:T.44, C:S.51, C:S.51, C:R.58, C:Y.72, C:E.155 pi-Stacking: C:Y.83

2 x TIA: 2-(1,5-DIDEOXYRIBOSE)-4-AMIDO-THIAZOLE(Non-covalent)

TIA.2: 6 residues within 4Å: Chain B: H.42, G.43, Y.72, A.80, Y.83, E.155 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:G.43, B:G.43, B:E.155 pi-Stacking: B:Y.83 TIA.5: 6 residues within 4Å: Chain D: H.42, G.43, Y.72, A.80, Y.83, E.155 4 PLIP interactions: 4 interactions with chain D Hydrogen bonds: D:G.43, D:G.43, D:E.155 pi-Stacking: D:Y.83

2 x AMP: ADENOSINE MONOPHOSPHATE(Non-covalent)

AMP.3: 11 residues within 4Å: Chain B: H.42, T.44, A.48, S.51, I.52, G.56, V.57, R.58, R.60, F.71, W.160 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:H.42, B:T.44, B:S.51, B:S.51, B:R.58 Salt bridges: B:R.60 AMP.6: 11 residues within 4Å: Chain D: H.42, T.44, A.48, S.51, I.52, G.56, V.57, R.58, R.60, F.71, W.160 6 PLIP interactions: 6 interactions with chain D Hydrogen bonds: D:H.42, D:T.44, D:S.51, D:S.51, D:R.58 Salt bridges: D:R.60

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, M. et al., Crystal structure of the catalytic domain of Pseudomonas exotoxin A complexed with a nicotinamide adenine dinucleotide analog: implications for the activation process and for ADP ribosylation. Proc.Natl.Acad.Sci.USA (1996)

Release Date

1996-06-10

Peptides

EXOTOXIN A: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

EXOTOXIN A