SMTL ID : 1afd.1

STRUCTURAL BASIS OF GALACTOSE RECOGNITION IN C-TYPE ANIMAL LECTINS

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-trimer

Ligands

8 x CA: CALCIUM ION(Non-covalent)

CA.1: 5 residues within 4Å: Chain A: D.89, E.93, D.116, E.126, D.127 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.89, A:E.93, A:D.116, A:D.127, H2O.1 CA.2: 5 residues within 4Å: Chain A: Q.113, D.115, E.126, N.138, D.139 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.115, A:E.126, A:D.139, A:D.139, H2O.5 CA.3: 1 residues within 4Å: Chain A: E.12 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.12, H2O.3, H2O.5 CA.5: 5 residues within 4Å: Chain B: D.89, E.93, D.116, E.126, D.127 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:D.89, B:E.93, B:D.116, B:D.127, H2O.7 CA.6: 5 residues within 4Å: Chain B: Q.113, D.115, E.126, N.138, D.139 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:D.115, B:E.126, B:D.139, B:D.139 CA.7: 5 residues within 4Å: Chain C: D.89, E.93, D.116, E.126, D.127 5 PLIP interactions: 4 interactions with chain C, 1 Ligand-Water interactions Metal complexes: C:D.89, C:E.93, C:D.116, C:D.127, H2O.9 CA.8: 5 residues within 4Å: Chain C: Q.113, D.115, E.126, N.138, D.139 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:D.115, C:E.126, C:D.139, C:D.139 CA.9: 1 residues within 4Å: Chain C: E.12 4 PLIP interactions: 1 interactions with chain C, 3 Ligand-Water interactions Metal complexes: C:E.12, H2O.1, H2O.10, H2O.10

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.4: 5 residues within 4Å: Chain A: G.125, E.126, D.127, S.141, C.142 Ligand excluded by PLIP CL.10: 5 residues within 4Å: Chain C: G.125, E.126, D.127, S.141, C.142 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kolatkar, A.R. et al., Structural basis of galactose recognition by C-type animal lectins. J.Biol.Chem. (1996)

Release Date

1996-04-03

Peptides

MANNOSE-BINDING PROTEIN-A: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
1

B
2

C
3

MANNOSE-BINDING PROTEIN-A

Related Entries With Identical Sequence