SMTL ID : 1akl.1

ALKALINE PROTEASE FROM PSEUDOMONAS AERUGINOSA IFO3080

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.176, H.180, H.186, Y.216 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.176, A:H.180, A:H.186, H2O.3

8 x CA: CALCIUM ION(Non-covalent)

CA.2: 6 residues within 4Å: Chain A: R.253, G.255, T.257, D.285, G.287, D.290 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:R.253, A:G.255, A:T.257, A:G.287, A:D.290 CA.3: 4 residues within 4Å: Chain A: G.288, D.290, T.327, E.329 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:G.288, A:T.327, A:E.329, A:E.329, H2O.10 CA.4: 8 residues within 4Å: Chain A: G.334, S.335, G.336, D.338, G.351, G.352, A.353, D.356 6 PLIP interactions: 6 interactions with chain A Metal complexes: A:G.334, A:G.336, A:D.338, A:G.351, A:A.353, A:D.356 CA.5: 8 residues within 4Å: Chain A: G.352, A.353, G.354, D.356, G.369, G.370, A.371, D.374 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:G.352, A:G.354, A:D.356, A:G.369, A:D.374 CA.6: 6 residues within 4Å: Chain A: G.370, A.371, G.372, D.374, Q.399, D.400 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:G.370, A:G.372, A:D.374, A:D.400, H2O.7 CA.7: 8 residues within 4Å: Chain A: N.343, D.344, V.345, N.347, G.360, G.361, L.362, D.365 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:N.343, A:V.345, A:G.360, A:L.362, A:D.365 CA.8: 6 residues within 4Å: Chain A: G.361, L.362, G.363, D.365, E.383, D.390 6 PLIP interactions: 5 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:G.361, A:G.363, A:D.365, A:E.383, A:D.390, H2O.13 CA.9: 5 residues within 4Å: Chain A: D.446, S.448, D.450, H.452, D.454 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.446, A:S.448, A:D.450, A:H.452, A:D.454

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Miyatake, H. et al., Crystal structure of the unliganded alkaline protease from Pseudomonas aeruginosa IFO3080 and its conformational changes on ligand binding. J.Biochem.(Tokyo) (1995)

Release Date

1996-03-08

Peptides

ALKALINE PROTEASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

ALKALINE PROTEASE

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