SMTL ID : 1amz.1

CHICKEN CITRATE SYNTHASE COMPLEX WITH NITROMETHYLDE-COA AND MALATE

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-dimer

Ligands

2 x MLT: D-MALATE(Non-covalent)

MLT.1: 8 residues within 4Å: Chain A: H.236, N.240, H.272, H.318, R.327, R.399 Chain B: R.419 Ligands: NMX.2 13 PLIP interactions: 12 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:N.240 Hydrogen bonds: A:H.236, A:R.327, A:R.327 Water bridges: A:H.318, A:H.318 Salt bridges: A:H.236, A:H.236, A:H.272, A:H.318, A:R.327, A:R.399, B:R.419 MLT.3: 8 residues within 4Å: Chain A: R.419 Chain B: H.236, N.240, H.272, H.318, R.327, R.399 Ligands: NMX.4 11 PLIP interactions: 10 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:N.240 Hydrogen bonds: B:R.327, B:R.327 Water bridges: B:H.318 Salt bridges: B:H.236, B:H.236, B:H.272, B:H.318, B:R.327, B:R.399, A:R.419

2 x NMX: NITROMETHYLDETHIA COENZYME A(Covalent)

NMX.2: 22 residues within 4Å: Chain A: R.44, L.271, H.272, G.273, A.275, L.307, V.312, V.313, P.314, G.315, Y.316, G.317, H.318, A.319, K.364, A.365, K.366, N.371, D.373, F.395 Chain B: R.162 Ligands: MLT.1 18 PLIP interactions: 14 interactions with chain A, 4 interactions with chain B Hydrogen bonds: A:L.271, A:L.271, A:V.313, A:V.313, A:G.315, A:Y.316, A:Y.316, A:K.366, A:N.371, B:R.162 Water bridges: A:R.322, A:R.322, A:N.367, B:L.417, B:L.417 Salt bridges: A:R.44, A:K.364, B:R.162 NMX.4: 22 residues within 4Å: Chain A: R.162 Chain B: R.44, L.271, H.272, G.273, A.275, L.307, V.312, V.313, P.314, G.315, Y.316, G.317, H.318, A.319, K.364, A.365, K.366, N.371, D.373, F.395 Ligands: MLT.3 18 PLIP interactions: 14 interactions with chain B, 4 interactions with chain A Hydrogen bonds: B:L.271, B:L.271, B:V.313, B:V.313, B:G.315, B:Y.316, B:Y.316, B:K.366, B:N.371, A:R.162 Water bridges: B:R.322, B:R.322, B:N.367, A:L.417, A:L.417 Salt bridges: B:R.44, B:K.364, A:R.162

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schwartz, B. et al., Mechanisms of Enzyme-Catalyzed Deprotonation of Acetyl-Coenzyme A. To be Published

Release Date

1997-12-24

Peptides

CITRATE SYNTHASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

CITRATE SYNTHASE

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