- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.59 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 18 x CU: COPPER (II) ION(Non-covalent)
CU.2: 4 residues within 4Å:- Chain A: H.445, C.507, H.512, M.517
3 PLIP interactions:3 interactions with chain A- Metal complexes: A:H.445, A:C.507, A:H.512
CU.3: 4 residues within 4Å:- Chain A: H.106, H.450, H.506
- Ligands: PEO.8
3 PLIP interactions:3 interactions with chain A- Metal complexes: A:H.106, A:H.450, A:H.506
CU.4: 5 residues within 4Å:- Chain A: H.62, H.104, H.508
- Ligands: CU.5, PEO.8
3 PLIP interactions:3 interactions with chain A- Metal complexes: A:H.62, A:H.104, A:H.508
CU.5: 6 residues within 4Å:- Chain A: H.60, H.62, H.448, H.450
- Ligands: CU.4, OH.6
3 PLIP interactions:2 interactions with chain A, 1 Ligand-Ligand interactions- Metal complexes: A:H.60, A:H.448, OH.6
CU.7: 2 residues within 4Å:- Chain A: H.286
- Chain B: H.286
2 PLIP interactions:1 interactions with chain B, 1 interactions with chain A- Metal complexes: B:H.286, A:H.286
CU.10: 4 residues within 4Å:- Chain B: H.445, C.507, H.512, M.517
3 PLIP interactions:3 interactions with chain B- Metal complexes: B:H.445, B:C.507, B:H.512
CU.11: 4 residues within 4Å:- Chain B: H.106, H.450, H.506
- Ligands: PEO.15
3 PLIP interactions:3 interactions with chain B- Metal complexes: B:H.106, B:H.450, B:H.506
CU.12: 6 residues within 4Å:- Chain B: H.62, H.104, H.448, H.508
- Ligands: CU.13, PEO.15
3 PLIP interactions:3 interactions with chain B- Metal complexes: B:H.62, B:H.104, B:H.508
CU.13: 6 residues within 4Å:- Chain B: H.60, H.62, H.448, H.450
- Ligands: CU.12, OH.14
3 PLIP interactions:2 interactions with chain B, 1 Ligand-Ligand interactions- Metal complexes: B:H.60, B:H.448, OH.14
CU.17: 4 residues within 4Å:- Chain C: H.445, C.507, H.512, M.517
3 PLIP interactions:3 interactions with chain C- Metal complexes: C:H.445, C:C.507, C:H.512
CU.18: 4 residues within 4Å:- Chain C: H.106, H.450, H.506
- Ligands: PEO.23
3 PLIP interactions:3 interactions with chain C- Metal complexes: C:H.106, C:H.450, C:H.506
CU.19: 5 residues within 4Å:- Chain C: H.62, H.104, H.508
- Ligands: CU.20, PEO.23
3 PLIP interactions:3 interactions with chain C- Metal complexes: C:H.62, C:H.104, C:H.508
CU.20: 6 residues within 4Å:- Chain C: H.60, H.62, H.448, H.450
- Ligands: CU.19, OH.21
3 PLIP interactions:2 interactions with chain C, 1 Ligand-Ligand interactions- Metal complexes: C:H.60, C:H.448, OH.21
CU.22: 2 residues within 4Å:- Chain C: H.286
- Chain D: H.286
2 PLIP interactions:1 interactions with chain C, 1 interactions with chain D- Metal complexes: C:H.286, D:H.286
CU.25: 4 residues within 4Å:- Chain D: H.445, C.507, H.512, M.517
3 PLIP interactions:3 interactions with chain D- Metal complexes: D:H.445, D:C.507, D:H.512
CU.26: 4 residues within 4Å:- Chain D: H.106, H.450, H.506
- Ligands: PEO.30
3 PLIP interactions:3 interactions with chain D- Metal complexes: D:H.106, D:H.450, D:H.506
CU.27: 6 residues within 4Å:- Chain D: H.62, H.104, H.448, H.508
- Ligands: CU.28, PEO.30
3 PLIP interactions:3 interactions with chain D- Metal complexes: D:H.62, D:H.104, D:H.508
CU.28: 6 residues within 4Å:- Chain D: H.60, H.62, H.448, H.450
- Ligands: CU.27, OH.29
3 PLIP interactions:2 interactions with chain D, 1 Ligand-Ligand interactions- Metal complexes: D:H.60, D:H.448, OH.29
- 4 x OH: HYDROXIDE ION(Non-covalent)
OH.6: 7 residues within 4Å:- Chain A: H.60, W.61, H.62, G.63, H.448, H.450
- Ligands: CU.5
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:G.63
- Water bridges: A:I.64, A:G.451, A:G.451
OH.14: 6 residues within 4Å:- Chain B: H.60, W.61, H.62, G.63, H.448
- Ligands: CU.13
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:G.63, B:L.449
- Water bridges: B:G.451, B:G.451
OH.21: 7 residues within 4Å:- Chain C: H.60, W.61, H.62, G.63, H.448, H.450
- Ligands: CU.20
4 PLIP interactions:4 interactions with chain C- Hydrogen bonds: C:G.63
- Water bridges: C:I.64, C:G.451, C:G.451
OH.29: 6 residues within 4Å:- Chain D: H.60, W.61, H.62, G.63, H.448
- Ligands: CU.28
4 PLIP interactions:4 interactions with chain D- Hydrogen bonds: D:G.63, D:L.449
- Water bridges: D:G.451, D:G.451
- 4 x PEO: HYDROGEN PEROXIDE(Non-functional Binders)
PEO.8: 7 residues within 4Å:- Chain A: H.104, H.106, H.450, H.506, H.508
- Ligands: CU.3, CU.4
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:H.508
PEO.15: 7 residues within 4Å:- Chain B: H.104, H.106, H.450, H.506, H.508
- Ligands: CU.11, CU.12
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:H.508
- Water bridges: B:R.111
PEO.23: 7 residues within 4Å:- Chain C: H.104, H.106, H.450, H.506, H.508
- Ligands: CU.18, CU.19
1 PLIP interactions:1 interactions with chain C- Hydrogen bonds: C:H.508
PEO.30: 7 residues within 4Å:- Chain D: H.104, H.106, H.450, H.506, H.508
- Ligands: CU.26, CU.27
2 PLIP interactions:2 interactions with chain D- Hydrogen bonds: D:H.508
- Water bridges: D:R.111
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Messerschmidt, A. et al., X-ray structures and mechanistic implications of three functional derivatives of ascorbate oxidase from zucchini. Reduced, peroxide and azide forms. J.Mol.Biol. (1993)
- Release Date
- 1994-01-31
- Peptides
- ASCORBATE OXIDASE: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.59 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 18 x CU: COPPER (II) ION(Non-covalent)
- 4 x OH: HYDROXIDE ION(Non-covalent)
- 4 x PEO: HYDROGEN PEROXIDE(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Messerschmidt, A. et al., X-ray structures and mechanistic implications of three functional derivatives of ascorbate oxidase from zucchini. Reduced, peroxide and azide forms. J.Mol.Biol. (1993)
- Release Date
- 1994-01-31
- Peptides
- ASCORBATE OXIDASE: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B