SMTL ID : 1atn.1

Atomic structure of the actin:DNASE I complex

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

hetero-1-1-mer

Ligands

1 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA.1: 4 residues within 4Å: Chain B: N.18, E.244, M.245, A.248 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:E.244

4 x CA: CALCIUM ION(Non-covalent)

CA.2: 2 residues within 4Å: Chain A: Q.138 Ligands: ATP.3 No protein-ligand interaction detected (PLIP) CA.4: 4 residues within 4Å: Chain B: D.201, T.203, T.205, T.207 5 PLIP interactions: 5 interactions with chain B Metal complexes: B:D.201, B:D.201, B:T.203, B:T.205, B:T.207 CA.5: 5 residues within 4Å: Chain B: D.99, C.101, D.107, F.109, E.112 5 PLIP interactions: 5 interactions with chain B Metal complexes: B:D.99, B:C.101, B:D.107, B:F.109, B:E.112 CA.6: 4 residues within 4Å: Chain B: D.172, D.198, S.199, N.208 2 PLIP interactions: 2 interactions with chain B Metal complexes: B:D.172, B:D.198

1 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)

ATP.3: 22 residues within 4Å: Chain A: G.14, S.15, G.16, L.17, K.19, G.75, S.156, G.157, D.158, G.159, V.160, G.183, R.184, R.211, K.214, E.215, G.302, G.303, T.304, M.306, Y.307 Ligands: CA.2 16 PLIP interactions: 16 interactions with chain A Hydrogen bonds: A:S.15, A:S.15, A:G.16, A:L.17, A:G.157, A:D.158, A:D.158, A:G.159, A:V.160, A:R.211, A:K.214, A:E.215, A:G.303, A:T.304 Salt bridges: A:K.19, A:K.19

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kabsch, W. et al., Atomic structure of the actin:DNase I complex. Nature (1990)

Release Date

1992-07-15

Peptides

ACTIN: A
DEOXYRIBONUCLEASE I: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
D

ACTIN

DEOXYRIBONUCLEASE I