SMTL ID : 1auk.1

HUMAN ARYLSULFATASE A

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-octamer

Ligands

8 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 8 residues within 4Å: Chain A: L.99, H.124, R.125, F.126, A.165, N.166, F.186, D.193 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.125 NAG-NAG.3: 8 residues within 4Å: Chain B: L.99, H.124, R.125, F.126, A.165, N.166, F.186, D.193 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:R.125 NAG-NAG.5: 8 residues within 4Å: Chain C: L.99, H.124, R.125, F.126, A.165, N.166, F.186, D.193 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:R.125 NAG-NAG.7: 8 residues within 4Å: Chain D: L.99, H.124, R.125, F.126, A.165, N.166, F.186, D.193 1 PLIP interactions: 1 interactions with chain D Hydrogen bonds: D:R.125 NAG-NAG.9: 8 residues within 4Å: Chain E: L.99, H.124, R.125, F.126, A.165, N.166, F.186, D.193 1 PLIP interactions: 1 interactions with chain E Hydrogen bonds: E:R.125 NAG-NAG.11: 8 residues within 4Å: Chain F: L.99, H.124, R.125, F.126, A.165, N.166, F.186, D.193 1 PLIP interactions: 1 interactions with chain F Hydrogen bonds: F:R.125 NAG-NAG.13: 8 residues within 4Å: Chain G: L.99, H.124, R.125, F.126, A.165, N.166, F.186, D.193 1 PLIP interactions: 1 interactions with chain G Hydrogen bonds: G:R.125 NAG-NAG.15: 8 residues within 4Å: Chain H: L.99, H.124, R.125, F.126, A.165, N.166, F.186, D.193 1 PLIP interactions: 1 interactions with chain H Hydrogen bonds: H:R.125

8 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 5 residues within 4Å: Chain A: D.11, D.12, G.51, D.263, N.264 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.11, A:D.12, A:D.263, A:D.263 MG.4: 5 residues within 4Å: Chain B: D.11, D.12, G.51, D.263, N.264 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:D.11, B:D.12, B:D.263, B:D.263 MG.6: 5 residues within 4Å: Chain C: D.11, D.12, G.51, D.263, N.264 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:D.11, C:D.12, C:D.263, C:D.263 MG.8: 5 residues within 4Å: Chain D: D.11, D.12, G.51, D.263, N.264 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:D.11, D:D.12, D:D.263, D:D.263 MG.10: 5 residues within 4Å: Chain E: D.11, D.12, G.51, D.263, N.264 4 PLIP interactions: 4 interactions with chain E Metal complexes: E:D.11, E:D.12, E:D.263, E:D.263 MG.12: 5 residues within 4Å: Chain F: D.11, D.12, G.51, D.263, N.264 4 PLIP interactions: 4 interactions with chain F Metal complexes: F:D.11, F:D.12, F:D.263, F:D.263 MG.14: 5 residues within 4Å: Chain G: D.11, D.12, G.51, D.263, N.264 4 PLIP interactions: 4 interactions with chain G Metal complexes: G:D.11, G:D.12, G:D.263, G:D.263 MG.16: 5 residues within 4Å: Chain H: D.11, D.12, G.51, D.263, N.264 4 PLIP interactions: 4 interactions with chain H Metal complexes: H:D.11, H:D.12, H:D.263, H:D.263

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lukatela, G. et al., Crystal structure of human arylsulfatase A: the aldehyde function and the metal ion at the active site suggest a novel mechanism for sulfate ester hydrolysis. Biochemistry (1998)

Release Date

1998-03-04

Peptides

ARYLSULFATASE A: ABCDEFGH

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

E
A

F
A

G
A

H
A

ARYLSULFATASE A