SMTL ID : 1aux.1

STRUCTURE OF THE C DOMAIN OF SYNAPSIN IA FROM BOVINE BRAIN WITH CALCIUM ATP-GAMMA-S BOUND

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-tetramer

Ligands

4 x CA: CALCIUM ION(Non-covalent)

CA.1: 3 residues within 4Å: Chain A: E.264, E.277 Ligands: AGS.2 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:E.264, A:E.264, A:E.277 CA.3: 3 residues within 4Å: Chain B: E.264, E.277 Ligands: AGS.4 2 PLIP interactions: 2 interactions with chain B Metal complexes: B:E.264, B:E.277 CA.5: 3 residues within 4Å: Chain C: E.264, E.277 Ligands: AGS.6 3 PLIP interactions: 3 interactions with chain C Metal complexes: C:E.264, C:E.264, C:E.277 CA.7: 3 residues within 4Å: Chain D: E.264, E.277 Ligands: AGS.8 2 PLIP interactions: 2 interactions with chain D Metal complexes: D:E.264, D:E.277

4 x AGS: PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER(Non-covalent)

AGS.2: 18 residues within 4Å: Chain A: K.116, I.138, V.158, K.160, H.165, S.166, G.167, K.170, E.196, P.197, F.198, I.199, D.204, E.264, L.266, I.276, E.277 Ligands: CA.1 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:K.160, A:S.166, A:G.167, A:E.196, A:P.197, A:I.199, A:D.204 Salt bridges: A:K.116, A:K.116, A:K.160, A:K.170, A:K.170 AGS.4: 19 residues within 4Å: Chain B: K.116, I.138, V.158, K.160, H.165, S.166, G.167, K.170, E.196, P.197, F.198, I.199, D.204, R.219, E.264, L.266, I.276, E.277 Ligands: CA.3 13 PLIP interactions: 13 interactions with chain B Hydrogen bonds: B:K.160, B:S.166, B:G.167, B:E.196, B:P.197, B:I.199, B:D.204, B:D.204, B:R.219 Salt bridges: B:K.116, B:K.160, B:K.170, B:K.170 AGS.6: 18 residues within 4Å: Chain C: K.116, I.138, V.158, K.160, H.165, S.166, G.167, K.170, E.196, P.197, F.198, I.199, D.204, E.264, L.266, I.276, E.277 Ligands: CA.5 11 PLIP interactions: 11 interactions with chain C Hydrogen bonds: C:K.160, C:S.166, C:G.167, C:P.197, C:I.199, C:D.204 Salt bridges: C:K.116, C:K.116, C:K.160, C:K.170, C:K.170 AGS.8: 19 residues within 4Å: Chain D: K.116, I.138, V.158, K.160, H.165, S.166, G.167, K.170, E.196, P.197, F.198, I.199, D.204, R.219, E.264, L.266, I.276, E.277 Ligands: CA.7 11 PLIP interactions: 11 interactions with chain D Hydrogen bonds: D:K.160, D:S.166, D:G.167, D:P.197, D:I.199, D:D.204, D:R.219 Salt bridges: D:K.116, D:K.160, D:K.170, D:K.170

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Esser, L. et al., Synapsin I is structurally similar to ATP-utilizing enzymes. EMBO J. (1998)

Release Date

1998-03-18

Peptides

SYNAPSIN IA: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

SYNAPSIN IA

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