Toggle navigation
SWISS-MODEL
SWISS-MODEL
Modelling
myWorkspace
Alignment Mode
User Template Mode
DeepView Project Mode
Modelling API
Template Library
Repository
SWISS-MODEL Repository
Repository API
3D-Beacons API
Annotation Projects
TBvar3D
Tools
Structure Assessment
Structure Comparison
QMEAN
Documentation
SWISS-MODEL
Examples
Video Tutorial
New Features
SWISS-MODEL Repository
QMEAN
Structure Assessment
Structure Comparison
TBvar3D
Protein Structure Course
References
Log in
Create Account
SMTL ID : 1ay8.1
AROMATIC AMINO ACID AMINOTRANSFERASE COMPLEX WITH 3-PHENYLPROPIONATE
Coordinates
PDB Format
Method
X-RAY DIFFRACTION 2.30 Å
Oligo State
homo-dimer
Ligands
2 x
PLP
:
PYRIDOXAL-5'-PHOSPHATE
(Covalent)
PLP.1:
14 residues within 4Å:
Chain A:
G.99
,
G.100
,
T.101
,
L.104
,
W.127
,
N.180
,
D.208
,
A.210
,
Y.211
,
S.240
,
S.242
,
K.243
,
R.251
Chain B:
Y.65
15
PLIP interactions
:
14 interactions with chain A
,
1 interactions with chain B
Hydrophobic interactions:
A:W.127
,
A:N.180
,
A:A.210
,
A:K.243
Hydrogen bonds:
A:G.100
,
A:T.101
,
A:T.101
,
A:N.180
,
A:S.240
,
A:S.242
,
A:S.242
Salt bridges:
A:K.243
,
A:R.251
pi-Stacking:
A:W.127
Water bridges:
B:S.281
PLP.2:
14 residues within 4Å:
Chain A:
Y.65
Chain B:
G.99
,
G.100
,
T.101
,
W.127
,
N.180
,
D.208
,
A.210
,
Y.211
,
S.240
,
S.242
,
K.243
,
R.251
Ligands:
HCI.3
15
PLIP interactions
:
13 interactions with chain B
,
2 interactions with chain A
Hydrophobic interactions:
B:W.127
,
B:N.180
,
B:A.210
,
B:K.243
Hydrogen bonds:
B:G.100
,
B:T.101
,
B:T.101
,
B:N.180
,
B:S.240
,
B:S.242
,
A:Y.65
,
A:Y.65
Salt bridges:
B:K.243
,
B:R.251
pi-Stacking:
B:W.127
1 x
HCI
:
HYDROCINNAMIC ACID
(Non-covalent)
HCI.3:
11 residues within 4Å:
Chain A:
Y.65
,
S.281
Chain B:
I.13
,
V.33
,
G.34
,
W.127
,
N.129
,
N.180
,
K.243
,
R.371
Ligands:
PLP.2
7
PLIP interactions
:
6 interactions with chain B
,
1 interactions with chain A
Hydrogen bonds:
B:G.34
,
B:N.180
Salt bridges:
B:K.243
,
B:R.371
pi-Stacking:
B:W.127
,
B:W.127
Hydrophobic interactions:
A:Y.65
Links
RCSB
PDBe
PDBe-KB
PDBj
PDBsum
CATH
PLIP
Citation
Okamoto, A. et al., Crystal structures of Paracoccus denitrificans aromatic amino acid aminotransferase: a substrate recognition site constructed by rearrangement of hydrogen bond network. J.Mol.Biol. (1998)
Release Date
1998-10-14
Peptides
AROMATIC AMINO ACID AMINOTRANSFERASE:
A
B
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
Export Alignment
FASTA format
Clustal Format
PNG Image
Secondary Structure
None
DSSP
PSIPRED
SSpro
Colour Scheme
Fade Mismatches
Enhance Mismatches
Chain
Unique Chain
Rainbow
2° Structure
Bfactor
Bfactor Range
SOA
Entropy
Clustal
Hydrophobic
Size
Charged
Polar
Proline
Ser/Thr
Cysteine
Aliphatic
Aromatic
No Colour
Background
3D Viewer
NGL
PV
2D
FASTA
Multi FASTA
ClustalW
PNG
AROMATIC AMINO ACID AMINOTRANSFERASE
Related Entries With Identical Sequence
1ay4.1
|
1ay5.1
|
2ay1.1
|
2ay2.1
|
2ay3.1
|
2ay4.1
|
2ay5.1
|
2ay6.1
|
2ay7.1
|
2ay8.1
|
2ay9.1
Cartoon
Cartoon
Tube
Trace
Lines
Ball+Stick
Licorice
Hyperball
Rope
Surface
Spacefill
Outline
Fog
Background
Transparent
Resolution
Low
Medium
High
Extreme