SMTL ID : 1b4w.1

BASIC PHOSPHOLIPASE A2 FROM AGKISTRODON HALYS PALLAS-IMPLICATIONS FOR ITS ASSOCIATION AND ANTICOAGULANT ACTIVITIES BY X-RAY CRYSTALLOGRAPHY

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

homo-tetramer

Ligands

2 x BOG: octyl beta-D-glucopyranoside(Non-covalent)

BOG.1: 10 residues within 4Å: Chain A: F.5, V.18, A.22, F.23, G.29, S.30 Chain C: V.19, F.23, A.109 Chain D: I.113 5 PLIP interactions: 4 interactions with chain A, 1 interactions with chain C Hydrophobic interactions: A:F.5, A:V.18, A:A.22 Hydrogen bonds: A:S.30, C:V.19 BOG.2: 9 residues within 4Å: Chain D: L.2, F.5, Y.21, A.22, C.28, G.29, H.47, Y.51, K.60 2 PLIP interactions: 2 interactions with chain D Hydrogen bonds: D:H.47 Water bridges: D:D.48

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhao, K. et al., Structure of basic phospholipase A2 from Agkistrodon halys Pallas: implications for its association, hemolytic and anticoagulant activities. Toxicon (2000)

Release Date

2000-01-12

Peptides

PROTEIN (PHOSPHOLIPASE A2): ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

PROTEIN (PHOSPHOLIPASE A2)

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