- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-dimer
- Ligands
- 7 x ZN: ZINC ION(Non-covalent)
ZN.1: 4 residues within 4Å:- Chain A: H.110, H.226, H.264
- Ligands: PGH.7
3 PLIP interactions:3 interactions with chain A- Metal complexes: A:H.110, A:H.226, A:H.264
ZN.2: 5 residues within 4Å:- Chain A: H.110, D.144, S.146, E.174, E.181
5 PLIP interactions:4 interactions with chain A, 1 Ligand-Water interactions- Metal complexes: A:D.144, A:D.144, A:E.174, A:E.181, H2O.4
ZN.3: 2 residues within 4Å:- Chain A: H.91, H.129
4 PLIP interactions:2 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: A:H.91, A:H.129, H2O.3, H2O.3
ZN.4: 2 residues within 4Å:- Chain A: S.1
- Ligands: CL.6
No protein-ligand interaction detected (PLIP)ZN.8: 4 residues within 4Å:- Chain B: H.110, H.226, H.264
- Ligands: PGH.12
3 PLIP interactions:3 interactions with chain B- Metal complexes: B:H.110, B:H.226, B:H.264
ZN.9: 5 residues within 4Å:- Chain B: H.110, D.144, S.146, E.174, E.181
5 PLIP interactions:4 interactions with chain B, 1 Ligand-Water interactions- Metal complexes: B:D.144, B:D.144, B:E.174, B:E.181, H2O.6
ZN.10: 2 residues within 4Å:- Chain B: H.91, H.129
4 PLIP interactions:2 interactions with chain B, 2 Ligand-Water interactions- Metal complexes: B:H.91, B:H.129, H2O.7, H2O.7
- 2 x NA: SODIUM ION(Non-functional Binders)
NA.5: 5 residues within 4Å:- Chain A: V.225, G.227, G.265, S.267
- Ligands: PGH.7
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:G.227, A:G.265
- Water bridges: A:V.225
NA.11: 5 residues within 4Å:- Chain B: V.225, G.227, G.265, S.267
- Ligands: PGH.12
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:V.225, B:G.227
- Water bridges: B:V.225
- 1 x CL: CHLORIDE ION(Non-functional Binders)
CL.6: 2 residues within 4Å:- Chain A: S.1
- Ligands: ZN.4
Ligand excluded by PLIP- 2 x PGH: PHOSPHOGLYCOLOHYDROXAMIC ACID(Non-covalent)
PGH.7: 16 residues within 4Å:- Chain A: D.109, H.110, V.225, H.226, G.227, H.264, G.265, G.266, S.267, N.286, I.287, D.288, T.289
- Chain B: K.325
- Ligands: ZN.1, NA.5
16 PLIP interactions:14 interactions with chain A, 2 interactions with chain B- Hydrogen bonds: A:N.35, A:V.225, A:G.227, A:G.265, A:G.266, A:S.267, A:S.267, A:N.286, A:D.288, A:T.289, A:T.289
- Water bridges: A:Q.59, A:Q.59, A:D.109, B:K.325
- Salt bridges: B:K.325
PGH.12: 15 residues within 4Å:- Chain B: D.109, H.110, V.225, H.226, G.227, H.264, G.265, G.266, S.267, N.286, I.287, D.288, T.289
- Ligands: ZN.8, NA.11
12 PLIP interactions:11 interactions with chain B, 1 interactions with chain A- Hydrogen bonds: B:N.35, B:V.225, B:G.227, B:G.265, B:G.266, B:S.267, B:S.267, B:N.286, B:D.288, B:T.289, B:T.289
- Water bridges: A:K.325
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Hall, D.R. et al., The crystal structure of Escherichia coli class II fructose-1, 6-bisphosphate aldolase in complex with phosphoglycolohydroxamate reveals details of mechanism and specificity. J.Mol.Biol. (1999)
- Release Date
- 2000-01-07
- Peptides
- PROTEIN (FRUCTOSE-BISPHOSPHATE ALDOLASE II): AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-dimer
- Ligands
- 7 x ZN: ZINC ION(Non-covalent)
- 2 x NA: SODIUM ION(Non-functional Binders)
- 1 x CL: CHLORIDE ION(Non-functional Binders)
- 2 x PGH: PHOSPHOGLYCOLOHYDROXAMIC ACID(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Hall, D.R. et al., The crystal structure of Escherichia coli class II fructose-1, 6-bisphosphate aldolase in complex with phosphoglycolohydroxamate reveals details of mechanism and specificity. J.Mol.Biol. (1999)
- Release Date
- 2000-01-07
- Peptides
- PROTEIN (FRUCTOSE-BISPHOSPHATE ALDOLASE II): AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B