- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.50 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x MG: MAGNESIUM ION(Non-functional Binders)
- 3 x PO4: PHOSPHATE ION(Non-functional Binders)
- 3 x IMH: 1,4-DIDEOXY-4-AZA-1-(S)-(9-DEAZAHYPOXANTHIN-9-YL)-D-RIBITOL(Non-covalent)
IMH.3: 18 residues within 4Å:- Chain A: S.33, H.86, Y.88, A.116, A.117, G.118, F.200, E.201, V.217, G.218, M.219, T.242, N.243, V.245, H.257, V.260
- Chain C: F.159
- Ligands: PO4.2
11 PLIP interactions:11 interactions with chain A- Hydrogen bonds: A:S.33, A:Y.88, A:Y.88, A:E.201, A:M.219, A:T.242, A:N.243, A:N.243
- Water bridges: A:E.201, A:E.201
- pi-Stacking: A:F.200
IMH.6: 18 residues within 4Å:- Chain A: F.159
- Chain B: S.33, H.86, Y.88, A.116, A.117, G.118, F.200, E.201, V.217, G.218, M.219, T.242, N.243, V.245, H.257, V.260
- Ligands: PO4.5
11 PLIP interactions:11 interactions with chain B- Hydrogen bonds: B:S.33, B:Y.88, B:Y.88, B:E.201, B:M.219, B:T.242, B:N.243, B:N.243
- Water bridges: B:Y.192, B:E.201
- pi-Stacking: B:F.200
IMH.9: 18 residues within 4Å:- Chain B: F.159
- Chain C: S.33, H.86, Y.88, A.116, A.117, G.118, F.200, E.201, V.217, G.218, M.219, T.242, N.243, V.245, H.257, V.260
- Ligands: PO4.8
11 PLIP interactions:11 interactions with chain C- Hydrogen bonds: C:S.33, C:Y.88, C:Y.88, C:E.201, C:M.219, C:T.242, C:N.243, C:N.243
- Water bridges: C:Y.192, C:E.201
- pi-Stacking: C:F.200
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Fedorov, A. et al., Transition state structure of purine nucleoside phosphorylase and principles of atomic motion in enzymatic catalysis. Biochemistry (2001)
- Release Date
- 1999-02-08
- Peptides
- PURINE NUCLEOSIDE PHOSPHORYLASE: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.50 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x MG: MAGNESIUM ION(Non-functional Binders)
- 3 x PO4: PHOSPHATE ION(Non-functional Binders)
- 3 x IMH: 1,4-DIDEOXY-4-AZA-1-(S)-(9-DEAZAHYPOXANTHIN-9-YL)-D-RIBITOL(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Fedorov, A. et al., Transition state structure of purine nucleoside phosphorylase and principles of atomic motion in enzymatic catalysis. Biochemistry (2001)
- Release Date
- 1999-02-08
- Peptides
- PURINE NUCLEOSIDE PHOSPHORYLASE: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
A