SMTL ID : 1bbu.1

LYSYL-TRNA SYNTHETASE (LYSS) COMPLEXED WITH LYSINE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

homo-dimer

Ligands

2 x LYS: LYSINE(Non-covalent)

LYS.1: 13 residues within 4Å: Chain A: G.216, A.217, E.240, R.262, M.276, E.278, Y.280, N.424, F.426, E.428, G.473, L.474, G.475 9 PLIP interactions: 9 interactions with chain A, Hydrophobic interactions: A:F.426 Hydrogen bonds: A:G.216, A:E.240, A:Y.280, A:N.424, A:E.428 Water bridges: A:E.278, A:E.278 Salt bridges: A:R.262 LYS.2: 13 residues within 4Å: Chain B: G.216, A.217, E.240, R.262, M.276, E.278, Y.280, N.424, F.426, E.428, G.473, L.474, G.475 5 PLIP interactions: 5 interactions with chain B, Hydrophobic interactions: B:F.426 Hydrogen bonds: B:G.216, B:N.424, B:E.428 Salt bridges: B:R.262

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Onesti, S. et al., Structural studies of lysyl-tRNA synthetase: conformational changes induced by substrate binding. Biochemistry (2000)

Release Date

2000-11-10

Peptides

PROTEIN (LYSYL-TRNA SYNTHETASE): AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

PROTEIN (LYSYL-TRNA SYNTHETASE)

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