- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x NGA: SUGAR (N-ACETYL-D-GALACTOSAMINE)(Non-covalent)9 x CA: CALCIUM ION(Non-covalent)
CA.4: 6 residues within 4Å:- Chain A: D.89, E.93, D.116, E.126, D.127
- Ligands: CA.6
5 PLIP interactions:4 interactions with chain A, 1 Ligand-Water interactions- Metal complexes: A:D.89, A:D.89, A:E.93, A:D.116, H2O.1822
CA.5: 6 residues within 4Å:- Chain A: Q.113, D.115, E.126, N.138, D.139
- Ligands: NGA.1
4 PLIP interactions:4 interactions with chain A- Metal complexes: A:D.115, A:E.126, A:D.139, A:D.139
CA.6: 3 residues within 4Å:- Chain A: E.93, D.127
- Ligands: CA.4
5 PLIP interactions:3 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: A:E.93, A:D.127, A:D.127, H2O.1824, H2O.1824
CA.8: 6 residues within 4Å:- Chain B: D.89, E.93, D.116, E.126, D.127
- Ligands: CA.10
5 PLIP interactions:4 interactions with chain B, 1 Ligand-Water interactions- Metal complexes: B:D.89, B:E.93, B:E.93, B:D.127, H2O.1826
CA.9: 6 residues within 4Å:- Chain B: Q.113, D.115, E.126, N.138, D.139
- Ligands: NGA.2
4 PLIP interactions:4 interactions with chain B- Metal complexes: B:D.115, B:E.126, B:D.139, B:D.139
CA.10: 3 residues within 4Å:- Chain B: E.93, D.127
- Ligands: CA.8
5 PLIP interactions:2 interactions with chain B, 3 Ligand-Water interactions- Metal complexes: B:E.93, B:D.127, H2O.1828, H2O.1828, H2O.1828
CA.11: 6 residues within 4Å:- Chain C: D.89, E.93, D.116, E.126, D.127
- Ligands: CA.13
5 PLIP interactions:4 interactions with chain C, 1 Ligand-Water interactions- Metal complexes: C:D.89, C:E.93, C:D.116, C:D.127, H2O.1829
CA.12: 6 residues within 4Å:- Chain C: Q.113, D.115, E.126, N.138, D.139
- Ligands: NGA.3
4 PLIP interactions:4 interactions with chain C- Metal complexes: C:D.115, C:E.126, C:D.139, C:D.139
CA.13: 3 residues within 4Å:- Chain C: E.93, D.127
- Ligands: CA.11
3 PLIP interactions:3 interactions with chain C- Metal complexes: C:E.93, C:D.127, C:D.127
- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
-
Kolatkar, A.R. et al., Mechanism of N-acetylgalactosamine binding to a C-type animal lectin carbohydrate-recognition domain. J.Biol.Chem. (1998)
- Peptides
- MANNOSE-BINDING PROTEIN-A: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
1B
2C
3
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-trimer
- Ligands
- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
-
Kolatkar, A.R. et al., Mechanism of N-acetylgalactosamine binding to a C-type animal lectin carbohydrate-recognition domain. J.Biol.Chem. (1998)
- Peptides
- MANNOSE-BINDING PROTEIN-A: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
1B
2C
3