SMTL ID : 1bfc.1

BASIC FIBROBLAST GROWTH FACTOR COMPLEXED WITH HEPARIN HEXAMER FRAGMENT

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x UAP: 4-deoxy-2-O-sulfo-alpha-L-threo-hex-4-enopyranuronic acid(Non-functional Binders)

UAP.1: 1 residues within 4Å: Ligands: SGN.2 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:K.130

3 x SGN: N,O6-DISULFO-GLUCOSAMINE(Non-covalent)(Non-functional Binders)

SGN.2: 7 residues within 4Å: Chain A: N.28, K.120, R.121, K.126, A.137 Ligands: UAP.1, IDS.3 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.28, A:R.121 Salt bridges: A:K.126 SGN.4: 2 residues within 4Å: Ligands: IDS.3, IDS.5 No protein-ligand interaction detected (PLIP) SGN.6: 4 residues within 4Å: Chain A: K.27, N.102, Y.104 Ligands: IDS.5 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:K.27, A:K.27, A:N.102 Salt bridges: A:K.27 Water bridges: A:K.27

2 x IDS: 2-O-sulfo-alpha-L-idopyranuronic acid(Non-covalent)

IDS.3: 8 residues within 4Å: Chain A: N.28, R.121, K.126, Q.135, K.136, A.137 Ligands: SGN.2, SGN.4 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:N.28, A:K.136, A:A.137 Salt bridges: A:R.121, A:K.126 IDS.5: 3 residues within 4Å: Chain A: K.136 Ligands: SGN.4, SGN.6 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:K.27, A:K.136

Links

RCSB   PDBe   PDBj   PDBsum   CATH   PLIP

Citation

Faham, S. et al., Heparin structure and interactions with basic fibroblast growth factor. Science (1996)

Peptides

BASIC FIBROBLAST GROWTH FACTOR: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

BASIC FIBROBLAST GROWTH FACTOR

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