SMTL ID : 1bh6.1

SUBTILISIN DY IN COMPLEX WITH THE SYNTHETIC INHIBITOR N-BENZYLOXYCARBONYL-ALA-PRO-PHE-CHLOROMETHYL KETONE

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

monomer

Ligands

1 x CA: CALCIUM ION(Non-covalent)

CA.1: 6 residues within 4Å: Chain A: Q.2, D.41, L.74, N.76, T.78, V.80 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.41, A:D.41, A:L.74, A:T.78, A:V.80

1 x NA: SODIUM ION(Non-functional Binders)

NA.2: 4 residues within 4Å: Chain A: A.168, K.169, Y.170, V.173 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:A.168

1 x 1BH: N-BENZYLOXYCARBONYL-ALA-PRO-3-AMINO-4-PHENYL-BUTAN-2-OL(Covalent)

1BH.3: 19 residues within 4Å: Chain A: H.63, L.95, G.99, G.101, Y.103, I.106, S.124, L.125, G.126, G.127, S.129, L.134, A.151, G.153, N.154, Y.166, G.218, T.219, S.220 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:L.95, A:I.106, A:L.134 Hydrogen bonds: A:G.101, A:S.124, A:G.126, A:G.126, A:N.154, A:N.154, A:S.220 pi-Stacking: A:Y.103

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Eschenburg, S. et al., Crystal structure of subtilisin DY, a random mutant of subtilisin Carlsberg. Eur.J.Biochem. (1998)

Release Date

1998-11-04

Peptides

SUBTILISIN DY: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

SUBTILISIN DY