SMTL ID : 1bhg.1

HUMAN BETA-GLUCURONIDASE AT 2.6 A RESOLUTION

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.53 Å

Oligo State

homo-tetramer

Ligands

4 x NAG- NAG- BMA- MAN- MAN- MAN- MAN- MAN- MAN: alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-MAN-MAN-MAN-MAN-MAN-MAN.1: 16 residues within 4Å: Chain A: D.33, N.34, R.35, G.77, W.78, Y.109, N.153, N.154, T.157, P.158, T.165, I.166, Q.167, Y.168, K.177, G.178 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.168, A:Y.168, A:Y.168 NAG-NAG-BMA-MAN-MAN-MAN-MAN-MAN-MAN.2: 14 residues within 4Å: Chain B: N.34, R.35, V.76, G.77, W.78, N.153, T.155, T.157, T.165, I.166, Y.168, T.170, K.177, G.178 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:N.34, B:R.35 Hydrogen bonds: B:Y.168, B:Y.168 NAG-NAG-BMA-MAN-MAN-MAN-MAN-MAN-MAN.3: 16 residues within 4Å: Chain C: D.33, N.34, R.35, G.77, W.78, Y.109, N.153, N.154, T.157, P.158, T.165, I.166, Q.167, Y.168, K.177, G.178 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:Y.168, C:Y.168, C:Y.168 NAG-NAG-BMA-MAN-MAN-MAN-MAN-MAN-MAN.4: 14 residues within 4Å: Chain D: N.34, R.35, V.76, G.77, W.78, N.153, T.155, T.157, T.165, I.166, Y.168, T.170, K.177, G.178 4 PLIP interactions: 4 interactions with chain D Hydrophobic interactions: D:N.34, D:R.35 Hydrogen bonds: D:Y.168, D:Y.168

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jain, S. et al., Structure of human beta-glucuronidase reveals candidate lysosomal targeting and active-site motifs. Nat.Struct.Biol. (1996)

Release Date

1997-09-17

Peptides

BETA-GLUCURONIDASE: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

BETA-GLUCURONIDASE

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