SMTL ID : 1bhq.1

MAC-1 I DOMAIN CADMIUM COMPLEX

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

homo-dimer

Ligands

3 x CD: CADMIUM ION(Non-covalent)

CD.1: 5 residues within 4Å: Chain A: D.8, S.10, S.12, T.77, D.110 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:S.10, A:S.12, A:D.110, H2O.1, H2O.4 CD.3: 4 residues within 4Å: Chain B: S.10, S.12, T.77, D.110 4 PLIP interactions: 3 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:S.10, B:S.12, B:D.110, H2O.4 CD.4: 1 residues within 4Å: Chain A: D.17 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.17, A:D.17, H2O.1, H2O.1

2 x ACE: ACETYL GROUP(Non-functional Binders)

ACE.2: 5 residues within 4Å: Chain A: S.1, K.36, R.98, F.102, E.188 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:K.36 Hydrogen bonds: A:F.102 ACE.5: 5 residues within 4Å: Chain B: S.1, K.36, A.101, F.102, E.188 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:F.102

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Baldwin, E.T. et al., Cation binding to the integrin CD11b I domain and activation model assessment. Structure (1998)

Release Date

1998-11-04

Peptides

CD11B: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
1

B
2

CD11B