SMTL ID : 1bt0.1

STRUCTURE OF UBIQUITIN-LIKE PROTEIN, RUB1

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: M.1, L.2, D.16, I.17 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:D.16 ZN.2: 2 residues within 4Å: Chain A: K.6, H.68 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.68, H2O.2, H2O.3

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 4 residues within 4Å: Chain A: E.12, I.13, E.14, K.33 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.14, A:K.33 Water bridges: A:E.14 EDO.4: 2 residues within 4Å: Chain A: E.31, P.38 No protein-ligand interaction detected (PLIP) EDO.5: 3 residues within 4Å: Chain A: K.4, G.64, V.66 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:G.64

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rao-Naik, C. et al., The rub family of ubiquitin-like proteins. Crystal structure of Arabidopsis rub1 and expression of multiple rubs in Arabidopsis. J.Biol.Chem. (1998)

Release Date

1998-12-30

Peptides

PROTEIN (UBIQUITIN-LIKE PROTEIN 7, RUB1): A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PROTEIN (UBIQUITIN-LIKE PROTEIN 7, RUB1)