- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.80 Å
- Oligo State
- homo-hexamer
- Ligands
- 6 x PPS: 3'-PHOSPHATE-ADENOSINE-5'-PHOSPHATE SULFATE(Non-covalent)
PPS.1: 10 residues within 4Å:- Chain A: K.16, Y.56, H.59, R.62, F.64, L.68, T.98, R.109, N.119, H.122
10 PLIP interactions:10 interactions with chain A- Hydrogen bonds: A:Y.56, A:Y.56, A:T.98, A:R.109, A:N.119
- pi-Stacking: A:F.64
- Salt bridges: A:K.16, A:H.59, A:R.62, A:H.122
PPS.2: 11 residues within 4Å:- Chain B: K.16, Y.56, H.59, F.64, L.68, T.98, R.109, V.116, N.119, I.121, H.122
8 PLIP interactions:8 interactions with chain B- Hydrogen bonds: B:Y.56, B:T.98, B:N.119
- pi-Stacking: B:F.64
- Salt bridges: B:K.16, B:H.59, B:R.109, B:H.122
PPS.3: 11 residues within 4Å:- Chain C: K.16, Y.56, H.59, F.64, L.68, R.92, T.98, V.116, N.119, I.121, H.122
11 PLIP interactions:11 interactions with chain C- Hydrogen bonds: C:Y.56, C:Y.56, C:R.92, C:T.98, C:N.119, C:I.121
- pi-Stacking: C:F.64, C:F.64
- Salt bridges: C:K.16, C:H.59, C:H.122
PPS.4: 10 residues within 4Å:- Chain D: K.16, Y.56, H.59, R.62, F.64, L.68, T.98, R.109, N.119, H.122
8 PLIP interactions:8 interactions with chain D- Hydrogen bonds: D:Y.56, D:R.109, D:N.119
- pi-Stacking: D:F.64
- Salt bridges: D:K.16, D:H.59, D:R.62, D:H.122
PPS.5: 11 residues within 4Å:- Chain E: K.16, Y.56, H.59, F.64, L.68, T.98, R.109, V.116, N.119, I.121, H.122
6 PLIP interactions:6 interactions with chain E- Hydrogen bonds: E:N.119
- pi-Stacking: E:F.64
- Salt bridges: E:K.16, E:H.59, E:R.109, E:H.122
PPS.6: 11 residues within 4Å:- Chain F: K.16, Y.56, H.59, F.64, L.68, R.92, T.98, V.116, N.119, I.121, H.122
9 PLIP interactions:9 interactions with chain F- Hydrogen bonds: F:Y.56, F:R.92, F:N.119, F:I.121
- pi-Stacking: F:F.64, F:F.64
- Salt bridges: F:K.16, F:H.59, F:H.122
- Links
- RCSB PDBsum PDBe CATH PLIP
- Citation
-
Schneider, B. et al., 3'-Phosphorylated nucleotides are tight binding inhibitors of nucleoside diphosphate kinase activity. J.Biol.Chem. (1998)
- Peptides
- NUCLEOSIDE DIPHOSPHATE KINASE: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
AE
BF
C
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.80 Å
- Oligo State
- homo-hexamer
- Ligands
- Links
- RCSB PDBsum PDBe CATH PLIP
- Citation
-
Schneider, B. et al., 3'-Phosphorylated nucleotides are tight binding inhibitors of nucleoside diphosphate kinase activity. J.Biol.Chem. (1998)
- Peptides
- NUCLEOSIDE DIPHOSPHATE KINASE: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
AE
BF
C