SMTL ID : 1bzo.1

THREE-DIMENSIONAL STRUCTURE OF PROKARYOTIC CU,ZN SUPEROXIDE DISMUTASE FROM P.LEIOGNATHI, SOLVED BY X-RAY CRYSTALLOGRAPHY.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.70, H.79, H.88, D.91 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.70, A:H.79, A:H.88, A:D.91 ZN.5: 4 residues within 4Å: Chain B: H.70, H.79, H.88, D.91 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:H.70, B:H.79, B:H.88, B:D.91

2 x CU: COPPER (II) ION(Non-covalent)

CU.2: 5 residues within 4Å: Chain A: H.45, H.47, H.70, M.123, H.125 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.45, A:H.47, A:H.125 CU.6: 5 residues within 4Å: Chain B: H.45, H.47, H.70, M.123, H.125 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:H.45, B:H.47, B:H.125

4 x IUM: URANYL (VI) ION(Non-covalent)

IUM.3: 1 residues within 4Å: Chain A: D.86 No protein-ligand interaction detected (PLIP) IUM.4: 1 residues within 4Å: Chain A: E.56 No protein-ligand interaction detected (PLIP) IUM.7: 1 residues within 4Å: Chain B: D.86 No protein-ligand interaction detected (PLIP) IUM.8: 1 residues within 4Å: Chain B: E.56 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bordo, D. et al., Evolutionary constraints for dimer formation in prokaryotic Cu,Zn superoxide dismutase. J.Mol.Biol. (1999)

Release Date

1999-04-09

Peptides

PROTEIN (SUPEROXIDE DISMUTASE): AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

PROTEIN (SUPEROXIDE DISMUTASE)