SMTL ID : 1c7d.1

DEOXY RHB1.2 (RECOMBINANT HEMOGLOBIN)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

hetero-1-2-mer

Ligands

4 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 14 residues within 4Å: Chain A: Y.42, F.43, H.45, H.58, K.61, L.83, L.86, H.87, L.91, V.93, N.97, F.98, L.101, L.136 18 PLIP interactions: 18 interactions with chain A, Hydrophobic interactions: A:Y.42, A:F.43, A:F.43, A:F.43, A:L.83, A:L.86, A:L.91, A:L.91, A:V.93, A:V.93, A:F.98, A:F.98, A:L.136 Water bridges: A:K.61 Salt bridges: A:H.45, A:K.61, A:K.61 Metal complexes: A:H.87 HEM.2: 16 residues within 4Å: Chain A: Y.185, F.186, H.188, H.201, K.204, A.208, L.226, L.229, H.230, L.234, V.236, N.240, F.241, L.244, V.275, L.279 17 PLIP interactions: 17 interactions with chain A, Hydrophobic interactions: A:Y.185, A:F.186, A:K.204, A:A.208, A:L.226, A:L.226, A:L.229, A:L.234, A:V.236, A:V.236, A:F.241, A:F.241, A:V.275, A:L.279 Salt bridges: A:H.188, A:K.204 Metal complexes: A:H.230 HEM.3: 13 residues within 4Å: Chain B: F.41, F.42, H.63, V.67, A.70, L.91, H.92, L.96, V.98, N.102, F.103, L.106, L.141 12 PLIP interactions: 12 interactions with chain B, Hydrophobic interactions: B:F.41, B:F.42, B:V.67, B:L.91, B:V.98, B:V.98, B:N.102, B:F.103, B:L.106, B:L.141 Salt bridges: B:K.66 Metal complexes: B:H.92 HEM.4: 15 residues within 4Å: Chain C: F.41, F.42, H.63, K.66, V.67, A.70, L.88, L.91, H.92, L.96, V.98, N.102, F.103, L.106, L.141 17 PLIP interactions: 17 interactions with chain C, Hydrophobic interactions: C:F.41, C:F.41, C:F.42, C:F.42, C:K.66, C:V.67, C:L.88, C:L.91, C:L.96, C:L.96, C:V.98, C:N.102, C:F.103, C:L.106, C:L.141 pi-Stacking: C:H.63 Metal complexes: C:H.92

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Brucker, E.A., Genetically crosslinked hemoglobin: a structural study. Acta Crystallogr.,Sect.D (2000)

Release Date

2000-06-30

Peptides

PROTEIN (DEOXYHEMOGLOBIN (ALPHA CHAIN)): A
PROTEIN (DEOXYHEMOGLOBIN (BETA CHAIN)): BC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
D

PROTEIN (DEOXYHEMOGLOBIN (ALPHA CHAIN))

PROTEIN (DEOXYHEMOGLOBIN (BETA CHAIN))

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