SMTL ID : 1c7g.1

TYROSINE PHENOL-LYASE FROM ERWINIA HERBICOLA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-tetramer

Ligands

4 x PLP: PYRIDOXAL-5'-PHOSPHATE(Covalent)

PLP.1: 11 residues within 4Å: Chain A: Q.98, G.99, R.100, E.103, F.123, T.126, D.214, T.216, R.217, S.254, K.257 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:F.123, A:F.123, A:T.216, A:K.257 Hydrogen bonds: A:Q.98, A:G.99, A:R.100, A:R.217, A:R.217, A:S.254 Water bridges: A:N.185 Salt bridges: A:R.100, A:K.256, A:K.257 pi-Stacking: A:F.123 PLP.2: 11 residues within 4Å: Chain B: Q.98, G.99, R.100, E.103, F.123, T.126, D.214, T.216, R.217, S.254, K.257 16 PLIP interactions: 16 interactions with chain B Hydrophobic interactions: B:F.123, B:F.123, B:T.216, B:K.257 Hydrogen bonds: B:Q.98, B:G.99, B:R.100, B:T.216, B:R.217, B:R.217, B:S.254 Water bridges: B:K.256 Salt bridges: B:R.100, B:K.256, B:K.257 pi-Stacking: B:F.123 PLP.3: 12 residues within 4Å: Chain C: Q.98, G.99, R.100, E.103, F.123, T.126, N.185, D.214, T.216, R.217, S.254, K.257 17 PLIP interactions: 17 interactions with chain C Hydrophobic interactions: C:F.123, C:N.185, C:T.216, C:K.257 Hydrogen bonds: C:Q.98, C:G.99, C:R.100, C:R.217, C:R.217, C:S.254, C:K.257 Water bridges: C:E.103, C:K.256 Salt bridges: C:R.100, C:K.256, C:K.257 pi-Stacking: C:F.123 PLP.4: 11 residues within 4Å: Chain D: Q.98, G.99, R.100, E.103, F.123, T.126, D.214, T.216, R.217, S.254, K.257 15 PLIP interactions: 14 interactions with chain D, 1 interactions with chain B Hydrophobic interactions: D:F.123, D:T.216, D:K.257 Hydrogen bonds: D:Q.98, D:G.99, D:R.100, D:T.216, D:R.217, D:R.217, D:S.254 Salt bridges: D:R.100, D:K.256, D:K.257 pi-Stacking: D:F.123 Water bridges: B:Y.71

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mikami, B. et al., The Structure of Tyrosine Phenol-Lyase from Erwinia Herbicola. To be Published

Release Date

2003-12-09

Peptides

TYROSINE PHENOL-LYASE: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

TYROSINE PHENOL-LYASE

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